Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_027356.1 Length=108065 Score E Sequences producing significant alignments: (Bits) Value seq89 95.1 8e-15 >seq89 Length=3091062 Score = 95.1 bits (104), Expect = 8e-15 Identities = 137/190 (72%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 44776 ATCTTCCCTAAACTAGTATTCTCAGTTAAAGAAGGATTAAATAAAAATCCAGGCGATCCT 44835 |||||||| ||||| || || ||| ||||| |||| | ||| | | | ||||| Sbjct 556676 ATCTTCCCAAAACTTGTGTTTTCAATTAAAAAAGGCGTGAATTTTAGTTCGAAAGATCCG 556735 Query 44836 AACTACGATATAAAACAGCTAGCACTTGAGTGTTCTGCTACCCGTATGTACCCGGACTAT 44895 || || ||||||||||| ||||| | ||||| ||| ||| | ||||| || || | Sbjct 556736 AATTATGATATAAAACAATTAGCATTAGAGTGCTCTACTAAAAGAATGTATCCTGATATT 556795 Query 44896 TTAAGTTACGAGAAAGTTGTAG--CTGTTACTGGTGATTTTAAAGCCCCTATGGGTTGTC 44953 || | ||| || ||| |||| | ||| |||||||||||||| || |||||||||| Sbjct 556796 TTGAATTATGATAAAACGGTAGAAATATTA--GGTGATTTTAAAGCTCCGATGGGTTGTC 556853 Query 44954 G-TAGTTTTT 44962 | | |||||| Sbjct 556854 GTTCGTTTTT 556863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345677293354372