Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_027382.1 Length=37146 Score E Sequences producing significant alignments: (Bits) Value seq157 306 9e-79 >seq157 Length=245904 Score = 306 bits (338), Expect = 9e-79 Identities = 456/639 (71%), Gaps = 11/639 (2%) Strand=Plus/Minus Query 36395 CCAGATTGTTGGCTATGGTTCAAAGGAGCTGCGCGTTGAAACCATATCCTGCTGGCTGGC 36454 |||||||||||| || || ||| | || |||| || |||||||| ||||||||||||| Sbjct 46074 CCAGATTGTTGGATACGGCTCACACGAATTGCGGGTAGAAACCATCGCCTGCTGGCTGGC 46015 Query 36455 CCGCACAATTATTCAGACAAA---GCACTATTCCCGCCGTTTTGTGAATAACTCTTACCT 36511 ||||| ||| | |||| ||| ||| ||| || ||||| ||||| || | || Sbjct 46014 CCGCATCATTGTA---ACAAGTCGGCATTATAGCCGGCGGTTTGTTAATAATTCCTGGCT 45958 Query 36512 CCACCTGGGAGTATTCAGCGGACGCGATCTGGTTGGCGTTCTCCAGTGGGGATATGCCCT 36571 || || || |||||| ||| | | | |||||||||| | ||||||||||| ||||| Sbjct 45957 ACATCTTGGGGTATTCTCCGGTAGGGCTTTGGTTGGCGTGATGCAGTGGGGATACGCCCT 45898 Query 36572 TAACCCCAACTCAGGTCGTCGTGTCGTGCTTGAAACGGATAACCGGGGCTATATGGAGTT 36631 || || ||| || || || || |||| || || | ||||||||| | Sbjct 45897 GAATCCTAACAGTGGCGCAAAAGTAGTCTCTGGCACGGGGAATCGTGAGTATATGGAGCT 45838 Query 36632 GAATCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGAATCACGGGCCATCAGCTA 36691 || ||| | ||||| || || |||||||| || || || ||||| || |||||||| Sbjct 45837 TAACCGCTTATGGCTGCATGATGACATGCCTAAAAATTCAGAGTCACGAGCGATCAGCTA 45778 Query 36692 CGCGCTGAAAGTTATCAGATTACTGTATCCGTCAG-TGGAGTGGGTTCAGTCCTTTGCTG 36750 || |||||| |||||||||||| ||||| |||| || | ||||| || |||||||| | Sbjct 45777 TGCACTGAAAACTATCAGATTACTTTATCC-TCAGGTGCAATGGGTGCAATCCTTTGCAG 45719 Query 36751 ACGAACGCTGCGGACGCGCAGGCGTTGTGTATCAGGCGTCGAATTTTGATTTTATTGGCA 36810 | || ||||| || || ||||| |||||||||||| | | ||||| | ||| |||| Sbjct 45718 ATGAGCGCTGTGGGCGTTGTGGCGTGGTGTATCAGGCG-AGTAATTTGAATATATCGGCA 45660 Query 36811 GCCATGAAAGCACG-TTCTACGAGCTGGATGGTGAGTGGTATCACGAGATAACGATGAAC 36869 ||||| | | || ||||| ||||| |||||||||||||||||||| ||| | ||| Sbjct 45659 GCCAT-TACTCGCGATTCTATGAGCTTGATGGTGAGTGGTATCACGAAATAGCCCGCAAC 45601 Query 36870 GCGATTAAGCGAGGTGGACAACGAGGCGTGTATTTACGGGCTAATAAAGAGCGTGCCGTG 36929 ||||| | ||| || || | ||||| | || | |||| |||| ||||||||| Sbjct 45600 GCGATCACGCGGGGCGGCAAGCGAGGAGAATACCTGAGGGCCAATATAGAGCGTGCAACT 45541 Query 36930 GTGCACAAATTTAATCAGTATCGCTACATCAGATTCCTGAACAAGCGAGCAAGGAAGCGG 36989 || || || | |||| || || ||| | || || |||| || || | |||||| Sbjct 45540 GTTCATCGCTTCCAGCAGTTCCGATATATCCGCTTTTTGGACAAACGCGCGAAGAAGCGC 45481 Query 36990 CTAAATACCAAGCTATTCAGGGTTCAGCCATACCCTAAG 37028 || ||||| || |||| | || ||||| || |||||| Sbjct 45480 CTCAATACAAAATTATTTAAAGTGCAGCCTTATCCTAAG 45442 Score = 306 bits (338), Expect = 9e-79 Identities = 456/639 (71%), Gaps = 11/639 (2%) Strand=Plus/Plus Query 36395 CCAGATTGTTGGCTATGGTTCAAAGGAGCTGCGCGTTGAAACCATATCCTGCTGGCTGGC 36454 |||||||||||| || || ||| | || |||| || |||||||| ||||||||||||| Sbjct 48964 CCAGATTGTTGGATACGGCTCACACGAATTGCGGGTAGAAACCATCGCCTGCTGGCTGGC 49023 Query 36455 CCGCACAATTATTCAGACAAA---GCACTATTCCCGCCGTTTTGTGAATAACTCTTACCT 36511 ||||| ||| | |||| ||| ||| ||| || ||||| ||||| || | || Sbjct 49024 CCGCATCATTGTA---ACAAGTCGGCATTATAGCCGGCGGTTTGTTAATAATTCCTGGCT 49080 Query 36512 CCACCTGGGAGTATTCAGCGGACGCGATCTGGTTGGCGTTCTCCAGTGGGGATATGCCCT 36571 || || || |||||| ||| | | | |||||||||| | ||||||||||| ||||| Sbjct 49081 ACATCTTGGGGTATTCTCCGGTAGGGCTTTGGTTGGCGTGATGCAGTGGGGATACGCCCT 49140 Query 36572 TAACCCCAACTCAGGTCGTCGTGTCGTGCTTGAAACGGATAACCGGGGCTATATGGAGTT 36631 || || ||| || || || || |||| || || | ||||||||| | Sbjct 49141 GAATCCTAACAGTGGCGCAAAAGTAGTCTCTGGCACGGGGAATCGTGAGTATATGGAGCT 49200 Query 36632 GAATCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGAATCACGGGCCATCAGCTA 36691 || ||| | ||||| || || |||||||| || || || ||||| || |||||||| Sbjct 49201 TAACCGCTTATGGCTGCATGATGACATGCCTAAAAATTCAGAGTCACGAGCGATCAGCTA 49260 Query 36692 CGCGCTGAAAGTTATCAGATTACTGTATCCGTCA-GTGGAGTGGGTTCAGTCCTTTGCTG 36750 || |||||| |||||||||||| ||||| ||| ||| | ||||| || |||||||| | Sbjct 49261 TGCACTGAAAACTATCAGATTACTTTATCC-TCAGGTGCAATGGGTGCAATCCTTTGCAG 49319 Query 36751 ACGAACGCTGCGGACGCGCAGGCGTTGTGTATCAGGCGTCGAATTTTGATTTTATTGGCA 36810 | || ||||| || || ||||| |||||||||||| | | ||||| | ||| |||| Sbjct 49320 ATGAGCGCTGTGGGCGTTGTGGCGTGGTGTATCAGGCG-AGTAATTTGAATATATCGGCA 49378 Query 36811 GCCATGAAAGCACG-TTCTACGAGCTGGATGGTGAGTGGTATCACGAGATAACGATGAAC 36869 ||||| | | || ||||| ||||| |||||||||||||||||||| ||| | ||| Sbjct 49379 GCCAT-TACTCGCGATTCTATGAGCTTGATGGTGAGTGGTATCACGAAATAGCCCGCAAC 49437 Query 36870 GCGATTAAGCGAGGTGGACAACGAGGCGTGTATTTACGGGCTAATAAAGAGCGTGCCGTG 36929 ||||| | ||| || || | ||||| | || | |||| |||| ||||||||| Sbjct 49438 GCGATCACGCGGGGCGGCAAGCGAGGAGAATACCTGAGGGCCAATATAGAGCGTGCAACT 49497 Query 36930 GTGCACAAATTTAATCAGTATCGCTACATCAGATTCCTGAACAAGCGAGCAAGGAAGCGG 36989 || || || | |||| || || ||| | || || |||| || || | |||||| Sbjct 49498 GTTCATCGCTTCCAGCAGTTCCGATATATCCGCTTTTTGGACAAACGCGCGAAGAAGCGC 49557 Query 36990 CTAAATACCAAGCTATTCAGGGTTCAGCCATACCCTAAG 37028 || ||||| || |||| | || ||||| || |||||| Sbjct 49558 CTCAATACAAAATTATTTAAAGTGCAGCCTTATCCTAAG 49596 Score = 170 bits (188), Expect = 5e-38 Identities = 291/418 (70%), Gaps = 8/418 (2%) Strand=Plus/Plus Query 35526 GATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCT 35585 ||| |||||| | ||||| |||| ||||||||| || || || | || | ||| | || Sbjct 192203 GATAGGCTATATGAGGGTGTCAAAAAATGACCAAAACACCGATTTACAGCAAAAATC-CT 192261 Query 35586 TG-TTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGAC- 35643 || |||| ||| ||||| ||||| ||||| |||||| | || |||| || ||||| Sbjct 192262 TGATTTGCGCAAATTGTGAGCAAATTTTTGAGGATAAAATCAGTGGAAAAA---CAGACC 192318 Query 35644 --AGACCTGGATTAAAACGCGCTTTAAAGCGTCTTCAAAAAGGTGACACACTGGTTGTCT 35701 ||||| |||||||||||||| ||||| | || || || || |||||||| |||| Sbjct 192319 AGAGACCCGGATTAAAACGCGCGTTAAACTGCCTGAAATCGGGCGATACACTGGTGGTCT 192378 Query 35702 GGAAACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTAC 35761 |||| || ||| | || || |||||||| |||||||||||| || | || || | Sbjct 192379 GGAAGCTCGATAGGCTGGGTCGAAGCATTAAACATTTGATTACTTTAATATCCAAACTGG 192438 Query 35762 GAGAGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTCATCTCCAATGG 35821 ||| ||| || |||||| || | || || | |||||||| || | | | Sbjct 192439 AAGATGAAGGCATCCATTTTCATAGCTTGACGGATACCATTGATACCTCTACGTCCGCAG 192498 Query 35822 GGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAGATGGAACGAGAACTAATCATCG 35881 | |||||||||||||| || ||| | || |||| | ||||| || ||||| || | | Sbjct 192499 GCCGTTTTTTCTTCCATGTGATGAGCGCGTTGGCACAAATGGAGCGGGAACTCATTGTTG 192558 Query 35882 AGAGAACGATGGCTGGACTTGCTGCTGCCAGAAATAAAGGCCGTATCGGTGGGCGACC 35939 || | || ||| || | || || || |||| | || || ||||| || |||| Sbjct 192559 AGCGTACTCAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGCATCGGGGGTAGACC 192616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118743623034192