Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq157 149 2e-31 >seq157 Length=245904 Score = 149 bits (164), Expect = 2e-31 Identities = 472/712 (66%), Gaps = 25/712 (4%) Strand=Plus/Plus Query 30276 CGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGACGGGAAGAAA 30335 ||||| ||||||||| ||| |||| || | | | |||||| | ||||| || ||| Sbjct 41837 CGCGACGGTGAGTTGAAGCAAATCAAACGGTTGGGGATTGAGCGTCATGACGGTAAAAAA 41896 Query 30336 GTCATTATGGCAGAAGGTGATTGCGAACCTTGTCTGTTCGGATGGCAGGCTCTGGACGCT 30395 |||| ||||| || ||||| ||||| |||||||| || |||||||| | || | Sbjct 41897 ATCATCATGGCGGAGTCCGATTGTGAACCCTGTCTGTTTGGCTGGCAGGCCATCAACCCC 41956 Query 30396 GGCGTGAGGGC-----GGTTGTACTTTGCGAAGGCGAAATTGATTGTATGAGCTATGC-G 30449 | || || ||| || |||| |||||||||||||| ||||| ||| | Sbjct 41957 AAAG--AGCGCAATCTGGTGGTGATTTGTGAAGGCGAAATTGACGCCATGAG-TATTCAC 42013 Query 30450 CAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAAGCAACAG 30509 || |||||| | |||| | || || || || |||||||| | || || ||||| ||| Sbjct 42014 CAGTACGGCCTTCCGGCACTGTCGGTTCCCTTCGGTGGCGGAACGGGGGCCAAGCAGCAG 42073 Query 30510 TGGATTGAGTTTGAGTATCACAACCTCGACAGGTTT-GAGGAAATATTCATCTCGATGGA 30568 ||||||||| |||||| | || || | || |||| || || |||||| | | ||||| Sbjct 42074 TGGATTGAGCATGAGTACGAAAATCT-GTCACGTTTCGAAGAGATATTCCTGTGCATGGA 42132 Query 30569 CGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGCAAGCCGACTCGGTGAACATCG 30628 | | || | | || | ||||| | |||||| || | ||| || || ||||| Sbjct 42133 CATGGACGCCGCCGGGCAATCCGCCGCCAAGGAAATTGCTACCCGTCTGGGGATCCATCG 42192 Query 30629 TTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTGATGAACGGTGTTAC 30688 |||| | |||| | || || |||| ||| |||||||||||| | || | || | Sbjct 42193 TTGCAGCTTTGTGAAACTCCCTCACAAGGACGCTAACGAATGCCTGGTCAATAATATTTC 42252 Query 30689 CGAGGATGAAATCTGGCAGTACATC-GGCACGGCATCCTAC-TTTGATCCTGAAGAACTC 30746 | ||| | | | || | || | ||| | || || || || ||||||| Sbjct 42253 AGTGGAGCAGTTTCAACGGTTCTTCATGGACG--CTGAGACGTTCGAACCCACAGAACTC 42310 Query 30747 TACAGCGCGCGAGAGTTTTACCAGG-ACACTAT-CAACGCTTTCTACGGCAAGCAGCAGT 30804 | | ||| | || || |||| | | || | | ||| | | | || | | Sbjct 42311 AAACGGGCGGGCGAATTCCGTCAGGAAGTCCATGCGGCTTTTTTTTC-ACCCGCTCCCG- 42368 Query 30805 ATCTGTTTAATCCA--CCGTGGGAATCTCTGGCAGATAAATTCCAGTTTCGTGAGGC-CG 30861 |||||| | ||| |||||| | |||| || | |||| ||| ||| || || || Sbjct 42369 GTCTGTTCA--CCAGTCCGTGGCCCACGCTGG-AGCTGAATTTCAGATTCAGGACGCACG 42425 Query 30862 AGTTGACGCTGGTCAATGGTGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATATGG 30921 | |||| |||||||| || || ||||||||||| ||| || || |||| |||||| ||| Sbjct 42426 AACTGACCCTGGTCAACGGCGTTAACGGTCACGGCAAATCGCAGTTTGTGGGGCATCTGG 42485 Query 30922 CACTTGAGGCAATGCGTCAGGGTGTGAAGACGTGCATCGCGTCACTTGAGCT 30973 | |||||||| | | ||||| ||| | |||||||| || | ||||| Sbjct 42486 CGCTTGAGGCGACGTACCAGGGGGTGTCTGCCTGCATCGCCTCGATGGAGCT 42537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123850738005696