Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= NC_027404.1
Length=167785
Score E
Sequences producing significant alignments: (Bits) Value
seq89 93.3 5e-14
>seq89
Length=3091062
Score = 93.3 bits (102), Expect = 5e-14
Identities = 182/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 41574 AATATCAGGATACATCCTTTTGCTTGCACACTCTAGAGCAAGCTGCTTAATATCATAGTT 41633
||||||||||||||| ||||| | | ||||||| || | || || |||||||| ||
Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736
Query 41634 CGGATCGTCTTTATAAAGATTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAAAAT 41693
|||||| | | || ||| || |||| || || | | ||||| || ||||| ||
Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676
Query 41694 AGGAGTTATCCCATCACGGCCAAGACCTTTAATGCGATTTTTCAGAATTGCTTTCTGAAT 41753
| ||| || | ||| || | |||||| || | | | || |||||||||| || ||
Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616
Query 41754 CATTCGTTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGCGTTTGTCC 41813
| || | || ||||| |||||| | |||||||||||| ||||| ||
Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556
Query 41814 GTTTGAACTGAATAACGTGTTCACTTCAT 41842
||||| | | || ||||| | |||||
Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCAT 556527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536774592860400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |