Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq46 105 6e-18 seq69 89.7 4e-13 >seq46 Length=4728336 Score = 105 bits (116), Expect = 6e-18 Identities = 168/237 (71%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 27013 AATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 |||||||| ||||| || | | || ||| | || | ||||| ||||| ||||||||| Sbjct 1479908 AATTATTGGCCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTG 1479967 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 || ||| | | || | ||||| || || || ||||| | ||||| | || ||| Sbjct 1479968 TAATCGGAGAGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGA 1480027 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-T 27190 || || || | || |||||||| ||| ||| ||| | | |||| | || |||| | Sbjct 1480028 TCTGGGGGAATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGAT 1480087 Query 27191 GGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || ||||| ||||| || | |||||| |||| ||| || || ||||| ||||| Sbjct 1480088 GGC-TCGACTTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || ||| || | || | || || |||||||||||||||||||| Sbjct 1480829 CCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAA 1480888 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| | |||||| || ||| | || | | ||||||||| || || Sbjct 1480889 AGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGG 1480948 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| |||||| || | |||| | ||||| | | ||| || Sbjct 1480949 ATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACC 1481008 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || ||||| || | |||||| |||| ||| || || || ||||||||| || || Sbjct 1481009 TCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCATACCTCCT 1481062 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| ||||| ||||||||| | | || | ||||| || ||||||||| Sbjct 1463686 GTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCTTCAAGTTGTTTACCG 1463745 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | || ||||| || || | ||| |||||||| |||||| |||| Sbjct 1463746 GCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCTTTATCCTGGATCTTAGCTTTC 1463805 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | ||||| | | ||| ||||| | ||| || | ||| || || | ||| Sbjct 1463806 ACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAAGTAATTGTTTTACCAGTTAAGGTT 1463865 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 1463866 TTAACAAAGATTTGCAT 1463882 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| ||||| | |||||| | ||| | ||||| ||||| ||||| || || ||| Sbjct 1481285 CCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAA 1481344 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| || ||||||| || || || || || |||| | | ||| ||||| || || Sbjct 1481345 AGTGTTCGGC-CGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGG 1481403 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||||||||| ||||| ||| | |||| | || || | | || || Sbjct 1481404 AATACCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGAC 1481463 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | ||| || | || || || ||||| ||||| ||||| ||||| Sbjct 1481464 TTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | ||| | ||| || | || | || || ||||||||||| || ||||| Sbjct 1481511 TGCCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAG 1481570 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || | ||||| |||||||| || ||| |||| | | ||| ||||| || | Sbjct 1481571 AAAGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGG 1481630 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || |||||||| |||||| || | |||| | |||||| | | || | Sbjct 1481631 GGATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTA 1481690 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || |||| ||||| || | ||| || || ||||| ||||| Sbjct 1481691 CTTCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 86.0 bits (94), Expect = 5e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 27085 TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACAC 27144 ||||| | ||||| | ||| |||||||| | ||||| | ||| || || || || | || Sbjct 1480665 TGCGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATAC 1480724 Query 27145 CCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTA 27204 | |||||||| || || ||| | |||| | || || | | ||| ||||| | Sbjct 1480725 CTTCTTTATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAA 1480784 Query 27205 GAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 |||| || | || || || | |||||||||||||||||||||| || || Sbjct 1480785 GAGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCATACCTCCT 1480834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || |||||||| |||||||| || | | |||| || | ||||| || ||||| || Sbjct 1480403 GTGGATTCTTTTTGGATATTGTAATCTGATAATGTA-CGACCATCTTCAAGTTGTTTGCC 1480461 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| |||| | | ||| ||||| || || | ||| ||||| || || || ||| Sbjct 1480462 GGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGAATTTTAGCTTT 1480521 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | |||| | || || | | ||| ||||| | || || | ||| || || | || Sbjct 1480522 TACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAGGTGATTGTTTTCCCTGTTAATGT 1480581 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||||||||||||||| Sbjct 1480582 TTTCACAAAGATTTGCAT 1480599 >seq69 Length=2547145 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 ||||||||||||| || |||||| |||| | | |||||| ||||| || | |||||| | Sbjct 1551537 CGTCTTCGAGCTGCTTCCCGGCGAAAATCAACCTCTGTTGGTCCGGTGGGATACCCTCCT 1551596 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 |||| ||||||| ||| | |||| | ||||| | || || || || || | Sbjct 1551597 TATCTTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGACTGCTCGACCTCAAGGGTGA 1551656 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | | |||||||| || || |||||||| || ||||| Sbjct 1551657 TTGTCTTGCCCGTTAGGGTCTTCACAAAAATCTGCAT 1551693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424927139199024