Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq157 147 8e-31 >seq157 Length=245904 Score = 147 bits (162), Expect = 8e-31 Identities = 280/406 (69%), Gaps = 11/406 (3%) Strand=Plus/Plus Query 13924 CGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGACGGGAAGAAA 13983 ||||| ||||||||| ||| |||| || | | | |||||| | ||||| || ||| Sbjct 41837 CGCGACGGTGAGTTGAAGCAAATCAAACGGTTGGGGATTGAGCGTCATGACGGTAAAAAA 41896 Query 13984 GTCATTATGGCAGAAGGTGATTGCGAACCTTGTCTGTTCGGATGGCAGGCTCTGGACGCT 14043 |||| ||||| || ||||| ||||| |||||||| || |||||||| | || | Sbjct 41897 ATCATCATGGCGGAGTCCGATTGTGAACCCTGTCTGTTTGGCTGGCAGGCCATCAACCCC 41956 Query 14044 GGCGTGAGGGC-----GGTTGTACTTTGCGAAGGCGAAATTGATTGTATGAGCTATGC-G 14097 | || || ||| || |||| |||||||||||||| ||||| ||| | Sbjct 41957 AAAG--AGCGCAATCTGGTGGTGATTTGTGAAGGCGAAATTGACGCCATGAG-TATTCAC 42013 Query 14098 CAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAAGCAGCAG 14157 || |||||| | |||| | || || || || |||||||| | || || ||||||||| Sbjct 42014 CAGTACGGCCTTCCGGCACTGTCGGTTCCCTTCGGTGGCGGAACGGGGGCCAAGCAGCAG 42073 Query 14158 TGGATTGAGTTTGAGTATCACAACCTCGACAGGTTT-GAGGAAATATTCATCTCGATGGA 14216 ||||||||| |||||| | || || | || |||| || || |||||| | | ||||| Sbjct 42074 TGGATTGAGCATGAGTACGAAAATCT-GTCACGTTTCGAAGAGATATTCCTGTGCATGGA 42132 Query 14217 CGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGCAAGCCGACTCGGTGAACATCG 14276 | | || | | || | ||||| | |||||| || | ||| || || ||||| Sbjct 42133 CATGGACGCCGCCGGGCAATCCGCCGCCAAGGAAATTGCTACCCGTCTGGGGATCCATCG 42192 Query 14277 TTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTG 14322 |||| | |||| | || || |||| ||| |||||||||||| Sbjct 42193 TTGCAGCTTTGTGAAACTCCCTCACAAGGACGCTAACGAATGCCTG 42238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184441729224636