Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq570 125 8e-24 >seq570 Length=38645 Score = 125 bits (138), Expect = 8e-24 Identities = 279/413 (68%), Gaps = 18/413 (4%) Strand=Plus/Minus Query 9485 TCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGACGA 9544 || |||||| |||| ||| || ||||||| || | | |||||| ||||| ||||| Sbjct 30170 TCACGTCCCTTAACATCTGGACGACCTACTTGAATTTGTCTATCAAAACGACCCGGACGT 30111 Query 9545 AGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCT--G 9602 | | || ||| | || ||| || || || || || || | || || ||| | Sbjct 30110 AATAATGCTGGATCTAAAATGTCAGGACGGTTAGTAGCAGCTATCATAATGATGCCTTCG 30051 Query 9603 TTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCAT 9662 ||| | | |||| |||||||| || || | ||| || | |||||||| ||||||| Sbjct 30050 TTT--TCACCAAATCCATCCATTTCAACTAATAATTGATTCAATGTTTGTTCACGTTCAT 29993 Query 9663 CATTCGCTG-GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATG 9721 | | | || || |||||||| ||||| ||| || |||||||| || |||||| Sbjct 29992 CGTGGCCACCGCCGAC-ACCAGCACCACGTTGACGTCCAACTGCATCAATTTCGTCAATG 29934 Query 9722 AAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCG 9781 || | ||| || || ||||| ||| |||||| | ||| |||||||| | || Sbjct 29933 AAAATGATACAAGGCGCATTTTTCTTAGCATTTTCAAATAAATCACGTACACGGCTTGCA 29874 Query 9782 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC-----ATTG-GATGAAGGGG 9835 || ||||||||||||||||| ||||||| | |||| |||| || ||| || Sbjct 29873 CCGACACCAACAAACATCTCAACAAAGT------CAGAACCACTGATTGAGAAGAATGGT 29820 Query 9836 ACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 | || |||||| |||| || || || || | || ||||| ||||| || Sbjct 29819 GTACCAGCTTCACCAGCAACCGCACGTGCAAGTAATGTTTTACCTGTACCAGG 29767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583250578354480