Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 >seq3 Length=17889087 Score = 116 bits (128), Expect = 3e-21 Identities = 233/340 (69%), Gaps = 13/340 (4%) Strand=Plus/Minus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 || |||||||||||||| | ||| || || |||||||||||||| || |||| |||| Sbjct 15712267 TGAGCAATCATGTATGTTAAAAGAGCATAGCTTGCAATGTTAAATGGAACTCCTAAGCCC 15712208 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTG- 111905 || ||| ||||||| ||||| ||||| || |||| || | || ||||||||||| Sbjct 15712207 ATGTCTGCCGATCTCTGATACAGCTGGCAAGATAATTCGCCATTTGCAACATAAAATTGT 15712148 Query 111906 ACAAAGTACATGACAAGGAGGCAATGCCATC------CCATTCATAAAGGGTCCCCATGC 111959 || || | ||| ||||| || | |||||| || |||| || ||| || Sbjct 15712147 ACCAAACA-ATGGCAAGGGGGTAGAGCCATCTTGTCTAAATGCATA---GGATTCCAGGC 15712092 Query 111960 ACACATGATCATCCTTCTGCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAG 112019 ||||| |||||||||| | | | |||| || ||| || ||| ||| || | Sbjct 15712091 GCACATAATCATCCTTCGGTCATTGGGATTGGTTTTAATAGTGTTTATTACAGCCATTAA 15712032 Query 112020 CTGGTCTATCCCTTTACCAGTATAATCCGCCTGACAT-CCAGTGTATGTTGCCCCATAGT 112078 ||||| | |||| || || ||||| | || ||| | | || || || | | Sbjct 15712031 TTGGTCGACACCTTGTCCTGTGTAATCTGTGTG-CATGTCTTTATAATCGGCTCCGAAAT 15711973 Query 112079 GTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGG 112118 | ||||| || |||||||||| |||||| ||||| || || Sbjct 15711972 GCCTCCACTGAAATCCATAAACAGGCCCAAGATCCCCTGG 15711933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391938902874526