Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq30 86.0 7e-12 >seq30 Length=5501227 Score = 86.0 bits (94), Expect = 7e-12 Identities = 202/301 (67%), Gaps = 8/301 (3%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| || || | || ||| || || |||||||| ||||| | | |||||||||||| Sbjct 4795300 GTGAAGATATACCTAGGGCTAGCGGCGTCCTTGCCGCCAGCCAATCTCGTACCGAATTGA 4795359 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | || | | | ||| | |||||| | || || ||||||| || | ||||| Sbjct 4795360 CCGATAGGTTGAAGAATGTTGATGTTGTTTGTACCGACGTAGTTTTGTGCGAGGTTGATG 4795419 Query 117425 ATCGT--ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482 || || || | |||| | ||||| |||||||| || | ||||| || || | | Sbjct 4795420 ATTGTTGACAT--GAGGGATGTTTCACCGTGGTGATAGGCAGAATGCTCGGCGACCGAAC 4795477 Query 117483 CCGCCAGCTGAGCCACCTTCATGT--CTGACGTCAGGTTCTTCTTGAGGCAGGCATAAAT 117540 | || || || || || || || | || |||| ||| |||| ||||||| ||| Sbjct 4795478 CGGCAAGTTGGGCGACTTTGATTTCCCTTTTGTCA--TTCCTCTTCAGGCAGGTGAAAAC 4795535 Query 117541 CACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATGTC 117600 ||||| | | || ||| ||||| || || ||| | || || || | || | |||| Sbjct 4795536 GACCTTCCTCGAACCTGGTTTCAGCCCGTCTAACACATTCGGAATTGACCTCTCGTTGTC 4795595 Query 117601 C 117601 | Sbjct 4795596 C 4795596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547206410039600