Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq157 113 1e-20 >seq157 Length=245904 Score = 113 bits (124), Expect = 1e-20 Identities = 297/445 (67%), Gaps = 19/445 (4%) Strand=Plus/Plus Query 4770 CAGTTCGGGCTGACCGATCAGGATGATGCTGAGCAGCTTGTCAAATCCGTCCTCGAACTG 4829 ||||||||| || || | ||||| |||| ||||| || | ||| || || || | || Sbjct 168843 CAGTTCGGGTTGTCCCAGCAGGACGATGGACAGCAGTTTTTTAAAGCCATCTTCCAGCTC 168902 Query 4830 ATCGCGCATGCGCTTGAGGTGGTTGAGGGTCTGGGTCGGGATCGAGTGCGCCTCTTCTAT 4889 | | | ||| || ||||| || | |||| || | || | | || || ||||| || Sbjct 168903 AAAG---AAGCGTTTAAGGTGCTTTAAGGTCGGGATGGGCAGGCAATGGGCTTCTTCAAT 168959 Query 4890 GATCACGACATGACGGTTGCCGGCGGCGTATGAGTTCTTG----AGGCAGGTGTGGACCT 4945 | || ||||| | || ||||| || || |||| || | ||||| | || Sbjct 168960 CACCAGTACATGGCTGTACCCGGCA-CGGCTGCTCTCTTTTAATAGTC-GGTGTAG--CT 169015 Query 4946 GGCGGAAGCGAGCTTCGGGGCTGGACTTAGGTGTTTCCAGCGGTGCCACGGCATACATGA 5005 | || ||||| ||||| || | || || ||||||| || |||| || || | | Sbjct 169016 GACGAAAGCGGGCTTCTGGTGAGCGTTTGAGTTTTTCCAGTGGGGCCAGGGTATGGACAA 169075 Query 5006 TGGCTTCTGCGATGTGAGTCGCTTTCAGGGTCTTGCCCTTGAT-GTCGTTGGCCTCCATG 5064 ||||||| |||| | |||||||||||||||||| |||| ||||||| | ||||| Sbjct 169076 TGGCTTCGGCGAGACTGGCGGCTTTCAGGGTCTTGCCC-TGATGGTCGTTGTCTTCCATT 169134 Query 5065 CCAACCACGAAGGGGTCGATGGTTATGACCGGCTCGTT---GCG---AAGACGGTGGGTC 5118 | | |||| |||| | || | || || |||| || || |||| ||| Sbjct 169135 GCCAGCACGTAGGGTTTAATCACCACCACGGGGGCGTTTTCCCGATAAATGCGGTCAGTC 169194 Query 5119 AGATCGCGACGCAGAGTGCTCTTGCCGGCACCGGACTCGCCCACGATGGCGAGGAAGCCG 5178 || || | ||||||||||| || || | |||||| || || | | ||||| ||||| Sbjct 169195 AGGTCATGTCGCAGAGTGCTTTTACCCGAACCGGATTCACCGATAACGGCGATAAAGCCA 169254 Query 5179 TCATGGCGTGCGGTTTGGTACATCG 5203 ||| || ||||| ||||||| || Sbjct 169255 CCATAACGGGCGGTCTGGTACAACG 169279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126573892667820