Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq157 109 2e-19 >seq157 Length=245904 Score = 109 bits (120), Expect = 2e-19 Identities = 207/302 (69%), Gaps = 16/302 (5%) Strand=Plus/Plus Query 15402 TCCATGCGATCGAATTCAGCAATGTAGGCTTCTTTGAAAGCGGCGGCTTTTTTGCCAGTG 15461 |||||||| | || || || ||||| ||||||||||| || || ||||| ||||| ||| Sbjct 211475 TCCATGCGGTTAAACTCCGCGATGTAAGCTTCTTTGAACGCTGCTGCTTTCTTGCCCGTG 211534 Query 15462 AACCCCATCACCAGGAAAACGAATCCGTTTTTGGTGAT--------TTGGTACATTGGGC 15513 || ||||| || ||||| ||||| |||| |||||| || || | || | | Sbjct 211535 AAGCCCATGACGAGGAAGACGAAGCCGTCTTTGGTCATGGTGAAGATTTTTGAATCGCGG 211594 Query 15514 GTTGCTCGCCTTTGGC---GTCGGTG-TAGGTAAC--GTCCTCAAAATTGAGGGCGTTAA 15567 |||| | || ||| | ||| || | | ||| |||||||||||||| || | || Sbjct 211595 GTTG--CACCGTTGCCAATTTCGATGCTTGAGAACATCTCCTCAAAATTGAGTGCATGAA 211652 Query 15568 ATTTCTCTGAGCATTCAATATTTGCAATGGCGCGCAATACGTTATCGTGTCGCTTGCAAA 15627 | || | || || |||| | || ||||||| ||||| ||||| || |||| || Sbjct 211653 AATTAGCAGAACAATCAAGGGAATCGATAGCGCGCAGCACGTTGTCGTGACGTTTGCCAA 211712 Query 15628 AATATTCGGCAACGGCAAAGGACGTAGTAACAGCGCGACCATTGGAAATGGTGATTTCAG 15687 | || || ||||| | ||| || |||||||| ||| ||| || || | || || Sbjct 211713 AGTAATCTGCAACATCTTTGGATGTGGTAACAGCTTTACCGTTGTGGATAGTAACTTTAG 211772 Query 15688 GT 15689 || Sbjct 211773 GT 211774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200994965565464