Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq89 86.0 7e-12 >seq89 Length=3091062 Score = 86.0 bits (94), Expect = 7e-12 Identities = 186/276 (67%), Gaps = 8/276 (3%) Strand=Plus/Minus Query 28653 ATATCAGGATACATACGTTTAGCTGCGCATTCTAATGCAAGCTGCTTAATATCATAGTTC 28712 |||||||||||||| | ||||| | ||| |||||||| | || || |||||||| ||| Sbjct 556794 ATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATTC 556735 Query 28713 GGGTCTTCTTTACGTAGATTAATGCCTTCTTCTACAAACATCACAAGCTTTGGAAAGATT 28772 || |||| || | ||| | ||||| || | | | |||||| ||||| ||||| Sbjct 556734 GGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGATG 556675 Query 28773 GGAGTAATTCCATCGCGTCCTAATCCACGAATACGATTATCAAGAATAGCTCGTTGAATT 28832 | |||||| | ||| || || || || | | | | |||||| ||| |||| Sbjct 556674 GCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTG---- 556619 Query 28833 AATTTTTCTTC-CCATG---ACGTGCCCATACCAAATGTGATAGTCACAAACGGGGTTTG 28888 ||||| | | ||| || || | |||||| | || ||||| || ||||| Sbjct 556618 GATTTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTG 556559 Query 28889 GCCATTTGAGCTGAACAAAGTATTCACTTCATATTC 28924 |||||||| | |||| || || | ||||||||| Sbjct 556558 ACCATTTGATGTATACAATGTGTTAATTTCATATTC 556523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532064275410160