Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028754.1 Length=120098 Score E Sequences producing significant alignments: (Bits) Value seq89 98.7 8e-16 >seq89 Length=3091062 Score = 98.7 bits (108), Expect = 8e-16 Identities = 230/345 (67%), Gaps = 4/345 (1%) Strand=Plus/Plus Query 52006 TAGAGTATGAAACTAATTCATTATTTAACTCTAATGGGCAGACCCCTTTTGTTACGCATG 52065 |||| ||||||| ||| |||| | || || ||||| || || |||||||| || | Sbjct 556521 TAGAATATGAAATTAACACATTGTATACATCAAATGGTCAAACACCTTTTGTAACATTAG 556580 Query 52066 GCTTTGGATTAGGTCAGGAGTGGGAGGAAAGGATGATTCAGAAAGCCATCCTCCAAAATC 52125 | ||||||||||| || | | | || || |||| || || | | | Sbjct 556581 GATTTGGATTAGGAACAGATACATATAGCCGTAAAATCCAACAAGCAATTCTTAACACTA 556640 Query 52126 GTATTAAAGGTTTAGGTGCTGCTGAGTCAACCCCTATCTTCCCTAAACTAGTATTCTCAG 52185 | || |||||||| ||| | | || | |||||||| ||||| || || ||| Sbjct 556641 GAATCAAAGGTTTGGGTAAAGATCGTATTACTGCCATCTTCCCAAAACTTGTGTTTTCAA 556700 Query 52186 TTAAAGAAGGGTTAAATAAAAATCCAGGCGATCCTAACTACGATATAAAACAGCTAGCAC 52245 ||||| |||| | ||| | | | ||||| || || ||||||||||| ||||| Sbjct 556701 TTAAAAAAGGCGTGAATTTTAGTTCGAAAGATCCGAATTATGATATAAAACAATTAGCAT 556760 Query 52246 TTGAGTGTTCTGCTACCCGTATGTACCCAGACTATTTAAGCTATGAGAAAGTTGTAG--C 52303 | ||||| ||| ||| | ||||| || || ||| | ||||| ||| |||| Sbjct 556761 TAGAGTGCTCTACTAAAAGAATGTATCCTGATATTTTGAATTATGATAAAACGGTAGAAA 556820 Query 52304 TGTTACTGGTGATTTTAAAGCCCCTATGGGTTGTCGTAGCTTTTT 52348 | ||| |||||||||||||| || |||||||||||| ||||| Sbjct 556821 TATTA--GGTGATTTTAAAGCTCCGATGGGTTGTCGTTCGTTTTT 556863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384182235413998