Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq89 102 9e-17 >seq89 Length=3091062 Score = 102 bits (112), Expect = 9e-17 Identities = 192/281 (68%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 120527 AAGCTTATGAATATGAAGTAAATACTCTCTTTAGTTCAAACGGACAGACTCCTTTTGTAA 120586 ||| ||| ||||||||| | || || | | || ||||| || || || |||||||||| Sbjct 556516 AAGTTTA-GAATATGAAATTAACACATTGTATACATCAAATGGTCAAACACCTTTTGTAA 556574 Query 120587 CAATTACATTTGGTACGGGAACTGACTGGACTGAACGAATGATTCAGAAAGCAATTCTGA 120646 || | |||||| ||||| || | || | || || |||||||||| | Sbjct 556575 CATTAGGATTTGGATTAGGAACAGATACATATAGCCGTAAAATCCAACAAGCAATTCTTA 556634 Query 120647 AAAATCGTATTAAAGGTCTTGGTCGTGATGGGATAACTCCTATTTTCCCTAAGCTTGTTA 120706 | | | | || |||||| | ||| ||| | || ||| | || ||||| || ||||| Sbjct 556635 ACACTAGAATCAAAGGTTTGGGTAAAGATCGTATTACTGCCATCTTCCCAAAACTTGTGT 556694 Query 120707 TGTTCGTTGAAGAAGGTGTTAATCTTTATAAAGACGATCCGAACTATGATATTAAGCAGC 120766 | | || || |||| || ||| || | | |||||||| |||||||| || || Sbjct 556695 TTTCAATTAAAAAAGGCGTGAATTTTAGTTCGAAAGATCCGAATTATGATATAAAACAAT 556754 Query 120767 TTGCTCTAGAGTGCGCAAGCAAAAGGATGTATCCTGATATT 120807 | || |||||||| | | ||||| ||||||||||||||| Sbjct 556755 TAGCATTAGAGTGCTCTACTAAAAGAATGTATCCTGATATT 556795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534659429929280