Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028859.1 Length=42881 Score E Sequences producing significant alignments: (Bits) Value seq89 179 1e-40 >seq89 Length=3091062 Score = 179 bits (198), Expect = 1e-40 Identities = 240/330 (73%), Gaps = 3/330 (1%) Strand=Plus/Minus Query 9793 TAAATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACC 9852 |||||| |||| ||| | ||||| ||||||||||| | ||| ||||||| ||||| Sbjct 140634 TAAATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACA 140575 Query 9853 ACTCAAAGTGGTGTAAATGTAGCATCATTCACATTAGCAGTTAACCGCACATTTACGAAT 9912 || | || || | ||| || | || || ||||||| ||||| || ||||| ||| Sbjct 140574 ACACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAAT 140515 Query 9913 GCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTATTTAAAAAACAAGCAGAG 9972 || ||||| || ||||| ||||| || |||||| |||| |||| |||||||||||| Sbjct 140514 GCGCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGAT 140455 Query 9973 AACGTTAATAAATACCTATCTAAAGGATCGTTGA-CGGGCGTAGATGGTAGGTTACAAAC 10031 || || ||||| ||| | | ||||| | ||| | ||||||| || ||| | | ||| | Sbjct 140454 AATGTAAATAACTACTTGTTCAAAGG-TAGTTTAGCGGGCGTTGACGGTCGCATTCAATC 140396 Query 10032 GCGGAATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAG 10091 || | |||||||| | ||||| | ||||| | ||| || ||||| || |||||| Sbjct 140395 ACGTAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAG 140336 Query 10092 TATTCAATTTTTAGAACCGAAAAACTCAAA 10121 ||||||| | ||||| ||||| ||||| Sbjct 140335 CGTTCAATTCCTTGAACCTAAAAA-TCAAA 140307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137095317496332