Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq89 105 7e-18 >seq89 Length=3091062 Score = 105 bits (116), Expect = 7e-18 Identities = 192/280 (69%), Gaps = 1/280 (0%) Strand=Plus/Minus Query 40424 ATATCAGGATACATTCTTTTGCTTGCACACTCTAAAGCAAGCTGCTTAATATCATAGTTT 40483 |||||||||||||||||||| | | |||||||| || | || || |||||||| || Sbjct 556794 ATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATTC 556735 Query 40484 GGGTCGTCTTTATAAAGATTAACACCTTCTTCAACGAACATAACAAGTTTAGGGAAAATA 40543 || || | | || ||| || |||| || || | | |||||||| ||||| || Sbjct 556734 GGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGATG 556675 Query 40544 GGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAATC 40603 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556674 GCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGATT 556615 Query 40604 ATTCGTTCAGTCCAGTCAGTTCCAGTACCAAATGTAATTGTCACAAAAGGAGTCTGACCA 40663 | || | || ||||| |||||| | ||| |||||||| || |||||| Sbjct 556614 TTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACCA 556555 Query 40664 TTTGAACTAAAGAGAGTATTTACTTCATATTCATAAGCTT 40703 ||||| || | | || || | ||||||||| ||| ||| Sbjct 556554 TTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544937649800320