Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028915.1 Length=43228 Score E Sequences producing significant alignments: (Bits) Value seq89 248 2e-61 >seq89 Length=3091062 Score = 248 bits (274), Expect = 2e-61 Identities = 254/332 (77%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 8403 AATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAGC 8462 |||| |||| ||| || ||||| || || ||||| ||||||||||||||||||||| | Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 8463 GCCAAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAACGC 8522 || || ||||||||| | ||||| ||| | ||||| ||| | || ||||| || || Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 8523 TCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAAAA 8582 ||||| ||||| || ||||| || ||||| ||||| |||||||||||||||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 8583 TGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACG 8642 ||||||||| || || | |||||| || || |||||||| || || | |||||||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 8643 CAGTTATGAAAACAAAGTCGGGCAACGTGTGTTTGTTACAGAAGTAGTAGCGGACAGTGT 8702 || ||||||||| ||| || | ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 8703 TCAATTCTTAGAACCGAAGAATAGCAACCAAC 8734 ||||||| | ||||| || ||| ||||||| Sbjct 140332 TCAATTCCTTGAACCTAAAAATCAAAACCAAC 140301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138205699009560