Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq157 163 5e-36 >seq157 Length=245904 Score = 163 bits (180), Expect = 5e-36 Identities = 291/421 (69%), Gaps = 18/421 (4%) Strand=Plus/Plus Query 21862 ATTGGCTATGTACGCGTGTCAACAAATGACCAGAACACGGAATTGCAGCGTAACGCGCTG 21921 || |||||| | | ||||||| ||||||||| ||||| || || |||| || | || Sbjct 192204 ATAGGCTATATGAGGGTGTCAAAAAATGACCAAAACACCGATTTACAGCAAAAATCCTTG 192263 Query 21922 GAGTGCGCAGGATGTGAGCTGATTTTTGAGGATAAAATCAGCGGCACTA-AGTCCGACCG 21980 |||||| ||||||| |||||||||||||||||||| || | | || || | | Sbjct 192264 ATTTGCGCAAATTGTGAGCAAATTTTTGAGGATAAAATCAGTGGAAAAACAGACC-AGAG 192322 Query 21981 ACCGGGACTGAAA--------AAACTGCTCAGGACATTATCGGAGGGGGATACACTGGTG 22032 ||| ||| | ||| ||||||| | | | ||||| | |||||||||||| Sbjct 192323 ACCCGGATTAAAACGCGCGTTAAACTGC-CTGAA----ATCGG---GCGATACACTGGTG 192374 Query 22033 GTCTGGAAGCTGGACAGGCTGGGGCGTAATATGCGGCATCTGGTCATTCTGGTTGAGGAA 22092 ||||||||||| || |||||||| || | || ||| || | | | | | || Sbjct 192375 GTCTGGAAGCTCGATAGGCTGGGTCGAAGCATTAAACATTTGATTACTTTAATATCCAAA 192434 Query 22093 CTGCGCGAACGCGGCGTTAATTTTCGCAGCCTGACGGATGCTATTGATACCAGCACGCCG 22152 ||| || ||| | |||||| ||| |||||||| | ||||||||| ||| | Sbjct 192435 CTGGAAGATGAAGGCATCCATTTTCATAGCTTGACGGATACCATTGATACCTCTACGTCC 192494 Query 22153 ATGGGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAAATGGAACGAGAACTCATT 22212 || ||||||||||| ||||||||| | || |||| ||||||| || ||||||||| Sbjct 192495 GCAGGCCGTTTTTTCTTCCATGTGATGAGCGCGTTGGCACAAATGGAGCGGGAACTCATT 192554 Query 22213 GTCGAGCGGACTCGGGCCGGGCTGGAAGCGGCCAGAGCCAAAGGTCGTATTGGTGGCAGA 22272 || ||||| |||| ||| || | | || || ||| || || || || || || ||| Sbjct 192555 GTTGAGCGTACTCAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGCATCGGGGGTAGA 192614 Query 22273 C 22273 | Sbjct 192615 C 192615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93435244394076