Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_028962.1 Length=140961 Score E Sequences producing significant alignments: (Bits) Value seq89 141 8e-29 >seq89 Length=3091062 Score = 141 bits (156), Expect = 8e-29 Identities = 459/704 (65%), Gaps = 48/704 (7%) Strand=Plus/Minus Query 64227 TCTGACATTGAGAGAGAAACTTATAAAAAAGTTTTAGCAGGGTTAACTGGTTTAGATGCT 64286 ||||| ||| | |||| | | |||||||| ||||||||| ||||| || |||||| || Sbjct 2801656 TCTGAACCTGAAAAAGAAGCATTTAAAAAAGCTTTAGCAGGATTAACAGGCTTAGATACT 2801597 Query 64287 AAACAAGGCGGAGAAGGTATGAACCTTATTTCATATCAAGAACCTAGAAGACATT----- 64341 | |||| | || |||||| ||||| ||| | | || | | ||| Sbjct 2801596 CATCAAGCAGACGATGGTATGCCGCTTAT--CATGCTA----CATACGACAGATTTACGC 2801543 Query 64342 -ATAAAGCTGTTTTTGGATATATGGGTATGATGGAGTTTGTACATG---AACGTTCATAC 64397 | ||||| |||| | || ||||| |||||||| | || | || ||| | Sbjct 2801542 AAGAAAGCCGTTTATTCATTTATGGCGATGATGGAACAAATCCACGCTAAAAGTT---AT 2801486 Query 64398 TCTCATATATTTACAACTATTTTAAATAATAAAGAAACTAATTATTTATTAGATGAGTGG 64457 || ||||| ||||| || | || | || ||||| || ||||||||||| | ||| Sbjct 2801485 TCGCATATTTTTACTACATTACTACCTTCTAGTGAAACAAACTATTTATTAGACAAATGG 2801426 Query 64458 GTAAGAGAAGAAAGCCACTT--AAT-TAAAAAAGCTCAATTTATTGGTTATTTTTACAAA 64514 || | |||||| || || ||| |||| || | || |||||| | ||| | | ||| Sbjct 2801425 GTTATTGAAGAACCGCATTTGAAATATAAATCAGATAAAATTATTGATAATTATCATAAA 2801366 Query 64515 AAGTTAC----TAAACCCAGAGCCTACTACTTTTGATAGATATATGGCAAAAGTTGCCAG 64570 ||| |||| || || | | || |||| ||||||||| || | || Sbjct 2801365 ---TTATGGGGTAAA----GAAGCTTCAATTTATGATCAATATATGGCGCGCGTATCAAG 2801313 Query 64571 TGCGTTTTTAGAGAGTGCCTTATTCTACTCAGGGTTCTATTACCCTTTACTTTTAGCAGG 64630 | || ||||| | ||||||||||| || ||||||||||| ||| | | ||||| Sbjct 2801312 CGTATTCTTAGAAACATTTTTATTCTACTCTGGTTTCTATTACCCATTATATCTTGCAGG 2801253 Query 64631 TCAAGGTCGTATGACACAATCAGGAGCTGTTATATTTAAAATAACTCAAGATGAATCATA 64690 |||||| ||||| ||| |||| | || ||||||| |||||||| Sbjct 2801252 ACAAGGTAAAATGACTACATCTGGAGAAATCATCCGTAAAATATTATTGGATGAATCTAT 2801193 Query 64691 TCATGG----TTCAGCAGTAGGGTTGACAGCACAATATGATTATGAACAATTAAC----A 64742 |||||| || | ||| || || ||||| | ||| | |||| ||| | Sbjct 2801192 TCATGGCGTATTTACTGGTATGGATG----CACAAAGT--TTACG--CAATGAACTTTCA 2801141 Query 64743 GATACGGAAAAAGAAAAAGCTGATAAATTAATGTATAAATTACTTGACATATTATATGAT 64802 || | |||||| || |||| ||| || ||||||||||||| | || |||||| Sbjct 2801140 GAAAGTGAAAAACAACAAGCAGATCAAGAAATGTATAAATTATTAGAAGATTTATATAGA 2801081 Query 64803 AATGAAGTATCTTATACACATATGTTATATGATGACTTAGGATTAACTGAAGATGTAATT 64862 |||||||| ||||||| ||| | ||||||| | || || ||||||||||| || Sbjct 2801080 AATGAAGTTGCTTATACGCATTCACTTTATGATGCTATTGGTCTATCTGAAGATGTACTT 2801021 Query 64863 AGATATGTAGAATATAATTTTAATAGAGCCTTATCTAATTTAGG 64906 | ||||| ||||||| || | ||| || ||||| ||||| Sbjct 2801020 AACTATGTTAGATATAATGGCAACAAAGCTTTGTCTAACTTAGG 2800977 Score = 102 bits (112), Expect = 7e-17 Identities = 170/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 63273 ACCTAGTGTAAATAAAGCTAATGATGAATTACATGCAGTAGGTTTAGGTTCACTTAATTT 63332 |||| | || | ||||||||| || |||||| ||||||| |||||| | | ||| | Sbjct 2802657 ACCTGGCGTTAGAAAAGCTAATAGGGAGTTACATTCAGTAGGATTAGGTGTAATGAATCT 2802598 Query 63333 ACATGGACTCTTAGCTAAAAATATGATTAGTTATGGTTCATTAGAAGCTTTAGACCTCAT 63392 |||||| |||||||||||||| ||| |||||| || |||||| ||| || Sbjct 2802597 ACATGGCTACTTAGCTAAAAATAAAATTGGTTATGAATCTGAAGAAGCGAAAGATTTCGC 2802538 Query 63393 TAACAGCTTGTATAGTGCAATAAACTATAACTCTATTAAATCTAGTATGCACATTGCTAA 63452 |||| || | || || |||||| | || ||| || | ||| | |||||||| Sbjct 2802537 AAACATTTTCTTTATGATGATGAACTATTATTCCATTGAACGTTCAATGGAAATTGCTAA 2802478 Query 63453 AGAAA---AAGGTAAGTCATTTAAAGGGTTTGAAAAATCCGAGTATGCTAATGGTAATTA 63509 ||||| ||| |||| || ||||| || |||||||| || || || || ||||| || Sbjct 2802477 AGAAAGACAAG--AAGT-ATATAAAGACTTCGAAAAATCTGATTACGCAAACGGTAAGTA 2802421 Query 63510 TTT 63512 || Sbjct 2802420 CTT 2802418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450939297150320