Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029022.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq89 82.4 2e-11 >seq89 Length=3091062 Score = 82.4 bits (90), Expect = 2e-11 Identities = 174/258 (67%), Gaps = 10/258 (4%) Strand=Plus/Minus Query 11230 CAACCATATCTTCTGC-----AACTTCATTTCCAGTAGCTTCTTTTATAGATGAAATTTC 11284 ||||||| ||||| || ||| | ||||||| |||||| ||| ||||| ||| Sbjct 1237479 CAACCATTTCTTCAGCTTTATAACCT--TTTCCAG---CTTCTTCGATAATTGAAAGTTC 1237425 Query 11285 TAAGCATTCTTTCATAGTTGCCACTGGATTACCTCCAATTGAAAGCTGTCTTTCAGCCAG 11344 ||| | |||||| | |||||| ||||||||||| || || | ||||||||| | Sbjct 1237424 TAAACTTTCTTTTAAAGTTGCTACTGGATTACCACCTGCTGCCAAAATTCTTTCAGCTAA 1237365 Query 11345 TTCATCAATATGAAGTGCAGCTTCGTTATAAAGTTCTTCAAATTTTAGATGTAAAGTGAA 11404 |||||||| | | |||||| | || | |||||||||||| |||| | ||| Sbjct 1237364 ATCATCAATGTATTGGCTAGCTTCATCGTATAATTCTTCAAATTTAGTGTGTAGTGAGAA 1237305 Query 11405 AAATTGTTGACCTTTAACGAACCAGTGGAAGTTATGAAGTTTAATGTACAATACACTCCA 11464 || | | ||||| || |||| || || || || | ||| || | ||| |||| Sbjct 1237304 GAAATTAGGCCCTTTTACATACCAATGAAAATTGTGTAATTTGGTGAATGCTACTGTCCA 1237245 Query 11465 ATTAGCGATTTGCTTATT 11482 || || | ||| | ||| Sbjct 1237244 GTTTGCTACTTGTTGATT 1237227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149939903646468