Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029069.1 Length=165031 Score E Sequences producing significant alignments: (Bits) Value seq89 118 1e-21 >seq89 Length=3091062 Score = 118 bits (130), Expect = 1e-21 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 40279 AAATGTTAAATAGAGTCGTTTTAGTTGGAAGATTAACAAAAGAGGTTGAATTACGTTATA 40338 ||||| |||||||||| |||||||| || | ||||| ||||| |||| | | Sbjct 140633 AAATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAA 140574 Query 40339 CCCAATCTGGACAAGCTGTAGCCACGTTTACATTAGCAGTAAACAGAACATTTACAAACC 40398 | | || || ||| || || ||||| ||||||||||| | || |||||||| Sbjct 140573 CACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATG 140514 Query 40399 AGCAGGGAGAACGTGAAGCAGATTTCATAAATTGTGTGGTATGGAGAAAACAAGCCGAGA 40458 ||| || ||||| |||||||||||||| |||||||| || | ||||||||||| || | Sbjct 140513 CGCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATA 140454 Query 40459 ATGCAGCAAACT--TTCTTAAAAAGGGCAGTTTAGCCGGTGTAGATGGACG 40507 ||| | |||| || || ||| || |||||||| || || || || || Sbjct 140453 ATGTAAATAACTACTTGTTCAAA--GGTAGTTTAGCGGGCGTTGACGGTCG 140405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527961947304720