Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=17889087 Score = 107 bits (118), Expect = 2e-18 Identities = 235/340 (69%), Gaps = 9/340 (3%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 ||||||||||||||||| || | | ||||| || | ||||| ||||| || | ||| Sbjct 15712267 TGAGCAATCATGTATGTTAAAAGAGCATAGCTTGCAATGTTAAATGGAACTCCTAAGCCC 15712208 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG- 118664 |||||||| |||||||| |||| |||||||| | || || |||||||||||||| || Sbjct 15712207 ATGTCTGCCGATCTCTGATACAGCTGGCAAGATAATTCGCCATTTGCAACATAAAATTGT 15712148 Query 118665 ACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGATTCCAGGCTGT 118724 || | | || || || || ||| |||| | || |||||||||||| Sbjct 15712147 ACCAAACA-ATGGCAAGGGGGTAGAGCCATCTTGTCTAAATGCATAGGATTCCAGGCGCA 15712089 Query 118725 TA-AAACATGCCTTCTGCTATATGGTTCTACCTGTATACCCTCAATTAAATTC-TGAATC 118782 | || ||| ||||| | || || | | ||| | |||| | | | ||| Sbjct 15712088 CATAATCAT-CCTTCGGTCATTGGGATTGGTTTTAATAGTGTTTATTACAGCCATTAAT- 15712031 Query 118783 TGATCCACACCCTTTCCAGTATACTGAGACTCGCAT-CCTTTATATTCTGCCCCAAAAAA 118841 || || ||||| | ||| || || | | | |||| ||||||| || || || ||| Sbjct 15712030 TGGTCGACACCTTGTCCTGTGTAATCTGTGT-GCATGTCTTTATAATCGGCTCCGAAATG 15711972 Query 118842 TCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGG 118881 ||||| ||||| |||||||||||||| ||||| |||||| Sbjct 15711971 CCTCCACTGAAATCCATAAACAGGCCCAAGATC-CCCTGG 15711933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414469717886728