Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq46 98.7 7e-16 >seq46 Length=4728336 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 |||||||||||||| |||||||| || || || || || | || ||||| | || Sbjct 1481283 ATGCAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGAGCCATCA 1481224 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| |||||| |||||| ||||||||||| |||| || | Sbjct 1481223 GACACTATTGAAAAT--GTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACC 1481166 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | |||||||||||||||||| | || || | || | | || ||||| | Sbjct 1481165 AGCAGAGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATA 1481106 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 |||| ||||| || ||||||||||||||| Sbjct 1481105 ACATTCAAAAGGAATCGACTTTGCATTTGGTT 1481074 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| |||||||||||| | || || || || || | || ||||| | Sbjct 1480371 ATGCAAATCTTTGTGAAAACTTTAACAGGAAAGACAATCACCCTCGAAGTCGAGCCATCT 1480312 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| |||||| || || || || ||||| | || || | Sbjct 1480311 GACACCATTGATAAT--GTCAAAGCTAAGATTCAGGATAAGGAAGGGATCCCTCCAGACC 1480254 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| ||||||||||||| ||||| |||||||| |||| ||||| | || ||||||| Sbjct 1480253 AGCAGAGGTTAATTTTTGCTGGAAAGCAATTGGAAGACGGACGCACACTTTCGGATTACA 1480194 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 ||||||| ||||| |||| | ||| | || ||| Sbjct 1480193 ACATCCAGAAAGAATCCACTCTTCATCTTGTCTTG 1480159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355856319423654