Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq46 167 5e-36 seq12 98.7 2e-15 >seq46 Length=4728336 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 |||||||| || ||||| |||||||||||||| || || | ||| || | ||||| || Sbjct 1570237 ACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGCGTACGACCATCCTCG 1570178 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || |||||||| | | || ||||| || |||| |||||||||||| ||| Sbjct 1570177 AGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 1570118 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 || || ||| || || || |||||||| || ||||| || | |||||| |||||| Sbjct 1570117 ATTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAACTTCCAAAGTGATTGTCTTT 1570058 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || || |||||||| || || | ||||||||| || Sbjct 1570057 CCAGTAAGAGTCTTCACGAAGATCTGCATTTTCTG 1570023 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || ||||||||||| ||||||||||| ||||| |||||||||||||| | ||| || Sbjct 1480606 ACGGAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGT 1480665 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| | |||||| || || ||||| || | || ||||| || || | || Sbjct 1480666 GCGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACC 1480725 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || ||||| || || ||| || ||||| || || || || ||| || || || Sbjct 1480726 TTCTTTATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAG 1480785 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||||||| || | ||| || ||||| | ||||| Sbjct 1480786 AGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || | |||||| ||||||||||| ||||| |||||||| ||||||| ||| || | | Sbjct 1480154 AGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTGCGT 1480213 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||||| ||||| || || || || | | || ||||| ||||| | |||||| Sbjct 1480214 CCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCC 1480273 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| ||||| ||| || || || ||||||||||| || || ||||| ||| Sbjct 1480274 TTATCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTG 1480333 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || | ||| || ||||| | ||||| Sbjct 1480334 ATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| || || ||||| ||||| || ||||| || || || ||||| | || || Sbjct 1479923 CGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAGAGTGTA 1479982 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||| |||||||| || ||||| || | ||| || || || |||| |||| Sbjct 1479983 CGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGAATTCCT 1480042 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || ||||| || ||| |||||||| ||||| || || || || |||||| Sbjct 1480043 TCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACTTCGAGA 1480102 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || | |||||| || || | |||||| Sbjct 1480103 GTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||| || || || | ||| || || || |||||||||||||| || || | ||| || | Sbjct 1570475 AAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACG 1570416 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||| || |||||||| ||||| ||||| | | || ||||| || |||| |||||| Sbjct 1570415 TCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTC 1570356 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 |||||| |||||||| || || || || ||||| || || |||||| || | || Sbjct 1570355 CTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACTTCCAAGGT 1570296 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| || || ||||| || || | |||||| Sbjct 1570295 GATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| ||||| || || ||||| ||||||||||||| || || || ||||| Sbjct 1481756 AGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCC 1481815 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||| || || | ||||||||| || || | ||||| |||||| Sbjct 1481816 TCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCC 1481875 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || ||||| || || || || || || ||||| || | ||||| || Sbjct 1481876 TGGATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTT 1481935 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || | ||| || ||||| | ||||||| Sbjct 1481936 TTTCCGGTCAAAGTTTTCACAAAGATCTGCATT 1481968 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || | |||||||||||| || || ||||| || ||||| || || | ||| || | Sbjct 1463665 AGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGA 1463724 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| || || || || || |||||||| | ||| || || ||||||| ||||| Sbjct 1463725 CCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCT 1463784 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||||||||| |||||| ||||| || |||||||| ||| || || | ||| Sbjct 1463785 TTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAAGTA 1463844 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || | || || ||||| | |||||| Sbjct 1463845 ATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || |||||||| ||||| |||||||| || || || |||| ||| || | |||||||||| Sbjct 1480847 ACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTGCGTCCATCTTCC 1480906 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | ||| || || |||||||| | | ||||| || || || | ||||| || ||||| Sbjct 1480907 AACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATCCTGA 1480966 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || || ||||| || ||||| || ||| ||||| |||||||| || || Sbjct 1480967 ATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAGAGTGATGGTTTTG 1481026 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | ||||||||| || | ||||| Sbjct 1481027 CCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || || || || ||||| || ||||||||||| | ||| || | || ||||| Sbjct 1481303 ACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAAAGTGTTCGGCCGTCTTCA 1481362 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 || ||||| ||||| || || | | || || || ||||||| || || || || || Sbjct 1481363 AGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTTTATCTTGA 1481422 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| ||| || ||||| || || ||||| || || || | |||||| |||||| Sbjct 1481423 ATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGACTTCCAAAGTGATGGTCTTT 1481482 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || || | |||||| Sbjct 1481483 CCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 114 bits (126), Expect = 3e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || | |||||| ||||| || || ||||| || ||||||||||||| ||| || | | Sbjct 1463893 AGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCCGAAAGAGTGCGT 1463952 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||| ||| || || |||||||| | | ||||| || || || | ||||| Sbjct 1463953 CCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCT 1464012 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||||| ||||| || || ||||| || ||||| || ||| ||||| || Sbjct 1464013 TTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAG 1464068 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || |||| |||||||| || ||||| ||||||||||| || ||||| | | || | Sbjct 1480382 AGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAATGTACGA 1480441 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| || || ||||| || || || | | || || || ||||| | ||||| Sbjct 1480442 CCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCTTCT 1480501 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || ||| |||||||| || || ||||| ||| || || | ||| Sbjct 1480502 TTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAGGTG 1480561 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || | || || ||||| | |||||| Sbjct 1480562 ATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCATT 1480600 Score = 100 bits (110), Expect = 7e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || ||||| ||||||||||| | || || | ||||| || || || || || Sbjct 1481086 AGTCGATTCCTTTTGAATGTTATAATCTGAGAGCGTACGCCCATCCTCGAGTTGTTTTCC 1481145 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || || || || | || ||||| || |||| ||||| ||||| || || || ||| Sbjct 1481146 GGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGTATTTTAGCTTT 1481205 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || ||||| || ||||| || || || || | ||| || |||||||| || ||||| Sbjct 1481206 GACATTTTCAATAGTGTCTGATGGCTCGACTTCTAAAGTTATGGTCTTTCCGGTTAGAGT 1481265 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 1481266 TTTAACAAAAATTTGCAT 1481283 >seq12 Length=11555272 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | ||| ||||| | ||||| ||||| ||||| || |||| || || || Sbjct 5006514 GAAGTCTAAAGACTAGGTGGATGGTGGATTCTTTCTGGATATTGTAATGAGCGAGCGTGT 5006455 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 | |||| |||| ||| |||||| | | ||||| || ||||||||||| | || Sbjct 5006454 TGCCATTCTCCAACTGTTTGCCTCCATAAATAAGACGCTGTTGGTCAGGCTTGATGGATT 5006395 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 | || | | ||| ||| || | ||||| | || || | ||||||||||| | | Sbjct 5006394 CTTTCACTTCAATCGCTTGCTTTAGTTTTTCAACAGTATCGGTACTTTCAACCTCAACGG 5006335 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTATG 211120 ||| | | |||||||| || |||||||| || ||||| |||||| Sbjct 5006334 CGATGG---TGCCCGTGAGGGTTTTTACAAAGACTTGCATCTTTATG 5006291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159131178007730