Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq46 82.4 7e-11 >seq46 Length=4728336 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| || | | |||||||| | || || ||||| || |||||||| | Sbjct 1481057 CCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAG 1481116 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || ||||| || ||||| || || | ||||||||| | ||| Sbjct 1481117 AGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 1481176 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || |||||||| ||||| ||||| | | | || || | ||| || Sbjct 1481177 ATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACT 1481236 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | || || | ||||| || || ||||||||||| ||||||||| Sbjct 1481237 TCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCATC 1481284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429538260408026