Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq46 145 5e-30 >seq46 Length=4728336 Score = 145 bits (160), Expect = 5e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || ||||| | || || ||||| ||||| | ||||| || | | Sbjct 1480600 AATGCAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTC 1480541 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||||| ||||| |||||| |||||||||||| | || |||||||| Sbjct 1480540 TGATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCA 1480481 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||||||||||||||| ||||| | || || ||| |||||||| Sbjct 1480480 GCAGAGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCGTACATTATCAGATTACAA 1480421 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||| | || | ||||||||| | ||||||| Sbjct 1480420 TATCCAAAAAGAATCCACACTCCACCTTGTTTTAAGGCTCAGAGGAGG 1480373 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| || || ||||| || || ||| | ||||| || | | Sbjct 1481283 ATGCAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGAGCCATCA 1481224 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | ||| ||||| ||||||||||| | || ||||| || Sbjct 1481223 GACACTATTGAAAATGTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACCAG 1481164 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| |||||||| || || | || || | ||||| ||| Sbjct 1481163 CAGAGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATAAC 1481104 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || || ||||| ||| | |||||| ||||||| Sbjct 1481103 ATTCAAAAGGAATCGACTTTGCATTTGGTTCTCAGGTTGAGAGGAGG 1481057 Score = 123 bits (136), Expect = 2e-23 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || ||||| || |||||| | ||||| || | | Sbjct 1481511 ATGCAGATCTTCGTGAAGACTCTTACAGGAAAGACCATCACTTTGGAAGTCGAGCCTTCT 1481452 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||||| | ||||| | || | || || ||||| ||| | || |||||||| Sbjct 1481451 GATACAATTGAAAATGTTAAAGCTAAGA-TTCAAGATAAAGAGGGTATTCCTCCAGATCA 1481393 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTAC 23787 ||| | || || ||||| || || ||||| ||||||| || |||||| |||||| Sbjct 1481392 GCAGAGGTTGATTTTTGCAGGAAAGCAACTTGAAGACGGCCGAACACTTTC--CGATTAT 1481335 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || ||||| || || | ||| | || || || ||||||||||| Sbjct 1481334 AACATTCAGAAAGAATCTACCCTCCATCTTGTATTGAGATTGCGAGGAGG 1481285 Score = 123 bits (136), Expect = 2e-23 Identities = 171/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 23602 TTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTT 23661 |||| ||||||||||| ||||| || || || || ||||| || |||||| | |||||| Sbjct 1570020 TTACAGAAAATGCAGATCTTCGTGAAGACTCTTACTGGAAAGACAATCACTTTGGAAGTT 1570079 Query 23662 GACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACC 23720 || | ||||||| |||| ||| | ||| | ||||| ||||| ||||| | || Sbjct 1570080 GAGCCATCGGACACCATTGACAATGTCAAAGC-TAAAATCCAAGACAAGGAAGGAATTCC 1570138 Query 23721 GCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGG 23780 ||||| || ||| | || || || ||||| || || || || || | || || | Sbjct 1570139 CCCAGACCAGCAGAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACGCTTTC 1570198 Query 23781 CGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| |||||||| ||||| | || | ||||| |||||| ||||||| Sbjct 1570199 TGACTACAACATCCAAAAAGAATCCACCCTCCACCTTGTTTTGAGGTTGAGAGGAGG 1570255 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || ||||| |||||||| || || || | | Sbjct 1481055 ATGCAAATATTCGTAAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTCGAACCATCC 1480996 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | |||| | || | || || |||||||| | || |||||||| Sbjct 1480995 GACACAATTGAAAATGTTAAGGCCAAGA-TTCAGGATAAAGAAGGCATCCCACCAGATCA 1480937 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | ||||| || || || ||||| ||||||| | ||||||| | || ||||| Sbjct 1480936 ACAGAGGTTAATCTTCGCTGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGACTACAA 1480877 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | || | ||||| ||| || ||||||| Sbjct 1480876 TATTCAAAAAGAATCCACCCTTCACCTCGTTTTGAGGCTGAGAGGAGG 1480829 Score = 114 bits (126), Expect = 9e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || ||||| || ||||| |||||||| || | | Sbjct 1480371 ATGCAAATCTTTGTGAAAACTTTAACAGGAAAGACAATCACCCTCGAAGTCGAGCCATCT 1480312 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | || || || ||||| | || ||||| || Sbjct 1480311 GACACCATTGATAATGTCAAAGCTAAGA-TTCAGGATAAGGAAGGGATCCCTCCAGACCA 1480253 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTAC 23787 ||| | ||||| ||||| || || ||| ||||||||| |||||| ||| || ||||| Sbjct 1480252 GCAGAGGTTAATTTTTGCTGGAAAGCAATTGGAAGACGGACGCACACTTTCGG--ATTAC 1480195 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || ||||| ||||| | ||| | || || ||| | |||| || Sbjct 1480194 AACATCCAGAAAGAATCCACTCTTCATCTTGTCTTGAGGCTCAGAGGCGG 1480145 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || ||||| ||||||||||| ||||| || | || Sbjct 1480827 ATGCAAATCTTTGTGAAAACTTTAACAGGAAAGACGATCACTCTTGAAGTCGAACCATCG 1480768 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| |||||| || ||||||||| | || ||||| || Sbjct 1480767 GATACGATTGAAAATGTCAAAGCGAAAATTCAGGATAAAGAAGGTATCCCACCAGACCAG 1480708 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| || || | ||||| | |||||| | ||||| ||| Sbjct 1480707 CAGAGGCTCATCTTTGCCGGTAAGCAGTTAGAAGATGGGCGCACTCTTTCTGATTATAAC 1480648 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || ||||| ||||| | ||| | || ||||| | || || ||| Sbjct 1480647 ATCCAGAAAGAATCCACTCTTCATCTTGTCCTAAGGCTCCGTGGTGGA 1480600 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || ||||| |||||||||||||| || | | Sbjct 1480143 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGAGCCATCA 1480084 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| ||||| ||||| || |||||||| | || |||||||| Sbjct 1480083 GATACCATTGAAAACGTAAAAGCCAAAATCCAAGATAAAGAAGGAATTCCCCCAGATCAG 1480024 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||||||||| ||||||||||| | || || | ||||||||| Sbjct 1480023 CAAAGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCGTACACTCTCCGATTACAAT 1479964 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 1479963 ATTCAGAAAGAATCTAC 1479947 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 || |||||||| | || |||||||||||| | ||||| || ||||| ||||| ||||| Sbjct 1464017 GATAAAGAAGGCATCCCACCAGATCAACAGAGGTTAATCTTCGCCGGAAAACAGTTGGAA 1463958 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | ||||||| | ||||| ||||| || ||||| || ||| | ||| | || || Sbjct 1463957 GATGGACGCACTCTTTCGGATTATAACATTCAGAAAGAATCAACACTTCATCTTGTCTTG 1463898 Query 23824 AGGTTGCGAGGAGGA 23838 ||| | |||| ||| Sbjct 1463897 AGGCTCAGAGGCGGA 1463883 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || ||||| | || |||||||| ||||| | |||||||| | | Sbjct 1481968 AATGCAGATCTTTGTGAAAACTTTGACCGGAAAAACCATCACATTGGAAGTTGAGCCTTC 1481909 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| | || | |||| | |||||||||||| | |||||||| | Sbjct 1481908 AGATACAATTGAGAATGTGAAGGCCAAAA-TCCAGGACAAAGAAGGTATCCCGCCAGACC 1481850 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || || || ||||| ||||| || || | | ||| | ||||| | Sbjct 1481849 AACAAAGGCTGATTTTCGCTGGCAAGCAACTTGAGGATGGTAGAACTCTCTCGGATTATA 1481790 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||| || || || Sbjct 1481789 ACATTCAAAAGGAATCGAC 1481771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003824472216