Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq46 95.1 1e-14 >seq46 Length=4728336 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/235 (70%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 101007 TATTG-CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAA 101065 ||||| || ||||| | ||| | || | ||| | ||| |||||||| |||||||||||| Sbjct 1479911 TATTGGCCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAA 1479970 Query 101066 TCGGCCATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGT 101123 |||| | ||| | || |||||||| ||| ||||| ||| | || |||||||| || | Sbjct 1479971 TCGG--AGAGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGAT 1480028 Query 101124 CTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGG 101183 || ||| | |||||||| || ||||| ||| || | | | || |||| | Sbjct 1480029 CTGGGGGAATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATG 1480088 Query 101184 ACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | ||||| || || |||||||| ||||| || || | || || ||||| Sbjct 1480089 GCTCGACTTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||| ||| ||||| |||||||| || ||||| | | |||| | ||| || Sbjct 1481759 ACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCCTCA 1481818 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | ||| ||||| || | || ||||||||||||||| || | ||||||||||| Sbjct 1481819 AGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCCTGG 1481878 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| ||||||| | | || |||| | | ||| | || || ||||| Sbjct 1481879 ATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTTTTT 1481938 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATTATT 101242 || ||||| ||||| | ||| || |||||| || Sbjct 1481939 CCGGTCAAAGTTTTCACAAAGATCTGCATTGTT 1481971 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 || || || | ||| | || |||||||| ||||| ||||| |||| | |||| | Sbjct 1463668 CTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCA 1463727 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 ||||| | |||||| || ||| | ||||||||||| || ||| || | |||||||| Sbjct 1463728 TCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCTTTA 1463787 Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAA 101201 || || || |||||||| | | || || | | ||| | ||| | |||| Sbjct 1463788 TCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATG--GTTCTACTTCCAAAGTAA 1463845 Query 101202 TAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 | ||||| || || || ||||||| ||| ||||||||| Sbjct 1463846 TTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||| || | |||| |||||||| ||||| |||||||| || ||||| | Sbjct 1481057 CCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAG 1481116 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || ||| || | |||||| || ||| | || ||||| || |||||| ||| Sbjct 1481117 AGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 1481176 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | |||||||||||| ||||| ||| |||| | | || |||| | | | Sbjct 1481177 ATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACT 1481236 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | || || || || || || | ||||||| |||||||||||| Sbjct 1481237 TCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409653800177118