Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq13 149 5e-31 >seq13 Length=9188118 Score = 149 bits (164), Expect = 5e-31 Identities = 159/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 ||||| | || ||||| || ||||| || ||||||||| ||||| ||||||||||| Sbjct 3474710 GGGTCACGGATGTAAGTATCGATTAGAAGTGAATACATTTCGGAATGGATATTTTCTATT 3474769 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 || |||||||| ||||| || || || ||||| || ||||| ||||| | | |||| | | Sbjct 3474770 GCGATCTGAAAACCGTAGAAACACCTCGCTTCAGTCACTTGGACTTCTTGAGAAAACCGT 3474829 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 || || | ||||| ||||| || ||||| || || ||||| || |||||||| ||| Sbjct 3474830 TCGACAAGATTTTCATTTACAATCCCGTCCGATGCAGCGAAAAATGCTAAAACATGCGAT 3474889 Query 4989 ATAAAGTACTGTTCGTCAGGCTT-AAGTT 5016 | ||||| | || |||||||| ||||| Sbjct 3474890 AAAAAGTGCCTCTCATCAGGCTTCAAGTT 3474918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427042303056866