Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_030925.1 Length=138081 Score E Sequences producing significant alignments: (Bits) Value seq89 116 3e-21 >seq89 Length=3091062 Score = 116 bits (128), Expect = 3e-21 Identities = 211/305 (69%), Gaps = 3/305 (1%) Strand=Plus/Minus Query 46537 TATGATTCAAATATATGTG-GCAGTCTCCAAAAGTGTGAATAAACTTACCTACTTTTAAA 46595 ||||||| | || || || ||| || |||||||| || | ||| | || |||| |||| Sbjct 2013484 TATGATTTGAGTAAATATGAGCA-TCACCAAAAGTATGCACAAATTCTCCGACTTCTAAA 2013426 Query 46596 TCTAAGGTATGAGCGATTAAGTGAGTAAGTAAAGCATAGCTAGCTATATTGAAGGGTACA 46655 | | | ||| |||||||| || | |||| ||| || || || || || || ||| Sbjct 2013425 CCACATTCTTTAGCTATTAAGTGCGTTAATAAACTATAACTTGCAATGTTAAATGGCACA 2013366 Query 46656 CCTAAGAAAAAATCTGACGATCTCTGATATAACTTACAGGATAGGGTGCCGTTATCTACA 46715 |||||||| | ||| | |||||||||||| | || | | || | | ||| Sbjct 2013365 CCTAAGAATATATCAGCACTTCTCTGATATAATTGGCAACTCAATTTTCCATCTTGAACA 2013306 Query 46716 TAGAACTGGAACATAGTGTGGCAACTTGGTAAAGCTATTTCATCTAGTACACTAGGATTC 46775 || || |||||||| || ||||| ||||||||| ||| ||| | | || | |||||| Sbjct 2013305 TAAAATTGGAACATCGTATGGCATGGTGGTAAAGCCATTGTATCAATTTCAGTTGGATTC 2013246 Query 46776 CACGCTGTTACAAGAAGTCTCCTAGAATTTGGGTTAGACTTAATCTGTTCTATTAC-ATT 46834 ||||| | | | | |||| | |||||| |||||| ||||| || | ||||| || Sbjct 2013245 CACGCAGAAATGATATGTCTACGAGAATTAGGGTTATTTTTAATTTGATTAATTACTGTT 2013186 Query 46835 TTTAA 46839 ||||| Sbjct 2013185 TTTAA 2013181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441723458660720