Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq89 111 2e-19 seq145 82.4 8e-11 >seq89 Length=3091062 Score = 111 bits (122), Expect = 2e-19 Identities = 194/281 (69%), Gaps = 1/281 (0%) Strand=Plus/Minus Query 41496 AATGTCAGGATACATTCTTTTGCTTGCGCACTCTAGAGCAAGCTGTTTAATATCATAGTT 41555 ||| ||||||||||||||||| | | |||||||| || | ||||| |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 41556 CGGATCGTTTTTATAAAGATTAACACCTTCTTCAACAAACATAACAAGCTTAGGAAAAAT 41615 |||||| || | || ||| || |||| || || | | ||||| || || || || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 41616 AGGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 41675 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 41676 CATTCGTTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGCGTTTGCCC 41735 | || | || ||||| |||||| | |||||||||||| ||||| || Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 41736 GTTTGAACTAAAAAGAGTATTTACTTCATATTCATAAGCTT 41776 ||||| || | | || || | ||||||||| ||| ||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 >seq145 Length=74475 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 68831 GGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACCACTGAGCTAC 68885 |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct 31801 GGATTCGAACCAGCGACCAATTGGTTAACAGCCAACTGCTCTACCACTGAGCTAC 31855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546384024452160