Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq105 147 3e-30 >seq105 Length=1502237 Score = 147 bits (162), Expect = 3e-30 Identities = 305/450 (68%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 76300 TACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGT 76359 |||||||| ||| | ||||| || ||| || || || ||||| ||||| || || || Sbjct 285642 TACCTCATCTGCAGATGTATATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGT 285583 Query 76360 TCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGT 76419 || | ||| ||||||||| ||| |||| || | || || || || | | ||| Sbjct 285582 GCCCAAATTCTGTTGGTTGGATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAAC 285523 Query 76420 TCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGA 76479 || ||||| | ||| || || || |||| ||||| | | ||| || | ||| Sbjct 285522 ACCGGTTTCCACCTGAGACTCAATTATAGCATTCCACAAGTTTCTTGCGTCAATTTGTCG 285463 Query 76480 TTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAAC 76539 | | || || || ||||||||| | ||| | ||||| | | ||||| || Sbjct 285462 TATATAACGACCTTCGTTTTCATATTTTACATACAGATCCTCAAAGTTTTTACCCCAGAC 285403 Query 76540 ATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCA---CTCACCATCTTCCTT 76596 |||| | ||||||||||| || ||| ||||| | ||| || | | ||| Sbjct 285402 GTCATGAAGACCAGGACATTTATGCGGGCACATAAGACTCCATTTCTTATTAGATTC--- 285346 Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTC-TAC 76655 ||||| || ||| || | |||||| ||||| || ||| ||| ||||| |||| | ||| Sbjct 285345 AACCCTTTCCATGAACAAATCAGGAATCCAAAGTGCATAAAAAAGATCACGGGCCCGTAC 285286 Query 76656 GTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATG 76715 ||||| ||||| ||||| ||||| | ||| || ||||| | |||||||| |||||| | Sbjct 285285 -CTCTTCCTTTCCAGTATTTTTTTTCAAATCGAGAAACTCAAAAATATCAGCATGCCAAG 285227 Query 76716 GTTCTAGATATATCGCCATAACACCCGGTC 76745 | || || || || || | | |||| |||| Sbjct 285226 GCTCGAGGTAAATTGCAAAAGCACCTGGTC 285197 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 |||||||||||||| | ||||||| |||||||| ||| |||| || ||||| | |||| Sbjct 287923 TGAAATTCTCCAGATAGCACTCTTCTTGTGTAAATGTTAGTGGTGTACGGTTCAAAAGAT 287864 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || || | ||| ||||| || || || || ||||| || || | ||| | | Sbjct 287863 TCATTATTGCCGAGAATCTGAGCTGTAGATGCTGTAGGCATTGGAGCGATCAAAAGGGAA 287804 Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901 || || | |||||| || ||||| ||||| ||| ||||| ||||| ||||| ||| Sbjct 287803 TTCCTAACACCATGCTTTGCTATTTTCTCTTTGAGAGCATTCCAGTCCCATAGATCAGAT 287744 Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAAT 75933 || || |||| | ||||||||| | ||| Sbjct 287743 GGAGTCACTCCCCACATATCGTATTGCAAAAT 287712 Score = 113 bits (124), Expect = 6e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807 ||||| || |||||||| | ||||| ||||| |||||| ||||||| |||||||| | | Sbjct 285099 TTATTGCCACCCTGATCCACATATCGAGCAGTATTATTAAAAACTCTTAACATTGGCACA 285040 Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTA-CT 76866 | |||||||| | ||||||||||||| ||| |||| || ||| |||||| | | Sbjct 285039 AGTCCGTTAGAGATGCCATTTGTTCCAGCAATTAAACTGCCTTTTGCCCGAATACAATGT 284980 Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926 | || | || || || || || |||| || || | ||| | |||| ||||| || Sbjct 284979 ACGTGA-ATTCCAATACCACCAGCAGTTTTTGAAATCAACGCAGACTGTTTTAATGTATC 284921 Query 76927 ATAGATGCCCTCTATACTATCATC 76950 | |||| || || || |||||||| Sbjct 284920 AAAGATACCTTCGATGCTATCATC 284897 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||| | || ||||| | ||| || || ||||| ||||| || |||||||||||||||| Sbjct 284751 GTTGCAGCGTTAAAAAGTGTGGGGGAGGCATGTGTGAAATATCCTTCAGAAAGTAGATTG 284692 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || |||||||| | || || || || | ||||||||| | ||||| | ||||||| Sbjct 284691 TAAGTTTCAATTGCAGCGTCAATGTCTTCTCCATGAATTCCAATCGCGACTCTCATCAAC 284632 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATT 77142 ||||||||||||| || ||| | || || Sbjct 284631 ATATGCTGAGGTCTCTCGACAATTTTGTT 284603 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 ||| |||||| || ||| |||| |||||| ||||| | || || ||||| || || Sbjct 286276 TCCTTTGCTAACAGGTGAACCATCATATGTCTCGTACGGTCCAAGTTTCTCAGCAAGATC 286217 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 ||||| || || | ||| || ||||||||||| ||||| |||| || || | ||| Sbjct 286216 ACAACTTGCTTCAAGCGCGCCATAATAAATTGTCTCGAATATCTGTTTGTTCAATGTTTG 286157 Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113 || | || || || || || || | | || || | ||| |||| || ||||| Sbjct 286156 GGCCTGAATGCTCTCGAACGGGTACCTCATCAATATGAAAGTATCGGCTAAACCTTGAAC 286097 Query 76114 TCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 ||||| |||||||| | ||| ||| | || || Sbjct 286096 ACCAATTCCAATAGGACGATGCCTCATGTTCGA 286064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712921905824640