Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031039.1 Length=251042 Score E Sequences producing significant alignments: (Bits) Value seq89 313 4e-80 >seq89 Length=3091062 Score = 313 bits (346), Expect = 4e-80 Identities = 1037/1588 (65%), Gaps = 35/1588 (2%) Strand=Plus/Plus Query 190885 TGTAGGGATATCACTATTGACAAATAAAGTAGTAGAAATACCCTGATCAATATGTTGTTG 190944 ||||| || ||| ||| ||| ||||| | ||||||||||| ||||| | || ||| Sbjct 2802009 TGTAGAAATTTCAGAATTTACATATAAAATTGTAGAAATACCTTGATCCACGTGAGTTTG 2802068 Query 190945 GATTACTGCAACCATGTCAATAATTTTATTTTGATCCATATCATATGCTGATTTGTAAGA 191004 || || | | || || | ||| ||||||| ||| | |||| || || || | Sbjct 2802069 AATAGTTGAGATTAAATCTATTAATTTCATTTGATCTGTATTAAATGCAGACTTATAGTA 2802128 Query 191005 CCATTGAGT-TCTACCGTCTAGATATGGCATTGGATAGTATGTTGTAGAGTCATGATATG 191063 ||| || ||| | ||| |||||||||||||| ||||| | || | ||| | Sbjct 2802129 CCACATTGTCTCTGGTGATAAGA-ATGGCATTGGATAGAATGTTTCTGCGTTACCATAAG 2802187 Query 191064 TTCTGTTTTCAATTCGACTTACAACTGGCATAATAGATTGAGTTGAATTCTGTACATAAC 191123 | | | ||||||| | |||| |||||||| || ||||| ||| |||||||| Sbjct 2802188 TACGGCGTTCAATTTGGTCAACAATTGGCATAACTGAACTAGTTGCATTTTGTACATATG 2802247 Query 191124 TAATTGACTGTGTAGGTGCAATAGCAAGTCTATAAGCATGGTATAAACCATTTTCTTTTA 191183 ||| |||||||||||||| || | | ||| |||||| ||| |||| | ||| | Sbjct 2802248 AAATACTTTGTGTAGGTGCAATTGCTAAACGATATGCATGGAATAGGCCATGTGCTTCCA 2802307 Query 191184 CTTGTTCTGCTAATTCAGCCCAATCTTCTTTTGTTGGAACAAAGATTCCCTCAAATAATT 191243 ||| || | ||| | ||||||||| |||||||||| | || |||||||||| Sbjct 2802308 CTTCTTTTTGTAAAGCTTTCCAATCTTCAGCTGTTGGAACATCAAAACCTTCAAATAATT 2802367 Query 191244 CTTTTACTTTTTGACTTCTAGGTGTATAATCATT--TTCGATATAACGTTTAAAATAATT 191301 ||||||| | | | | | | || | || ||| || || ||| || || Sbjct 2802368 TACGAACTTTTTCATATTTCGCTTCAAAAGTTTGAGTTGTATAGAA--TTCAAAGTACTT 2802425 Query 191302 ACCATTAGCATATTCAGAATCTTCAAAACGATGGAAt--tttttatttttCTCAATAGCA 191359 ||| || || || ||||| | ||| || | || || || | ||||| ||||| Sbjct 2802426 ACCGTTTGCGTAATCAGATTTTTCGAAGTCTTTATATACTTCTTGTCTTTCTT--TAGCA 2802483 Query 191360 ATTTCCATACTTCGTCTAATACTATGGAAATTCATAATTGCAAAGAATACATTGGCAAAA 191419 |||||||| ||| ||| || | ||||| || |||||| | || || ||| Sbjct 2802484 ATTTCCATTGAACGTTCAATGGAATAATAGTTCATCATCATAAAGAAAATGTTTGCGAAA 2802543 Query 191420 TCTCTAGCTACAGCACTTTCATATGAAATACTATTTTTAGCAAGGAAACCATGTAAGTTC 191479 ||| | ||| | || |||||| ||| |||||||||| | | | ||||||| ||| Sbjct 2802544 TCTTTCGCTTCTTCAGATTCATAACCAATTTTATTTTTAGCTAAGTAGCCATGTAGATTC 2802603 Query 191480 ATTGCGCCTAAACCAACTGAATGGAATAGAGCATTTGCTTTTCTTATAGATGGTGCATTT 191539 ||| | ||||| || |||||||| || ||| |||||||| | |||||||| Sbjct 2802604 ATTACACCTAATCCTACTGAATGTAACTCCCTATTAGCTTTTCTAACGCCAGGTGCATTC 2802663 Query 191540 TTGATATCACTCTT-ATCTGTTACAGATGTTAAAATATCCATTGCAATATCTACAGAATC 191598 | ||||| | ||| ||| | ||| |||||| |||||| || | | ||| || || Sbjct 2802664 TGAATATC-CGCTTCATCACTAACAACCGTTAAAGCATCCATACCAGTGTGTACTGAGTC 2802722 Query 191599 TTTAAATTTTTTAGTCTCCATTACATTAACGATATTTAATGATGCAAGGTTACAACTGAT 191658 ||| ||||| | ||||| |||||||||||||||||||| | | ||||| ||| Sbjct 2802723 TTTGAATTTACCTGATTCCATCACATTAACGATATTTAATGAACCTAAATTACATGAGAT 2802782 Query 191659 -TCCCAATCCTAA-TTCATCTTCTTCTCCATAATTATTAATTACTGATACTGAACT-TAA 191715 || | | ||| ||||||||| ||||||| ||| || | || | | | ||| Sbjct 2802783 GTCACGTT--TAATTTCATCTTCAGTGCCATAATCATTGATAATAGA-AGTCTCTTGTAA 2802839 Query 191716 CTGCATAATTTCAGTACAAAGGTTAGAGAATTTAATTTCACCAATTGCTTTTAAAGCATG 191775 || | |||||||||||| | |||| | |||||||| ||||| | |||||| Sbjct 2802840 TTGGAAAATTTCAGTACATAAGTTACTCATTTTAATTTGTCCAATGTCAGAGTTAGCATG 2802899 Query 191776 TTCTTTATTAGCATTTGTTTTGAAGAACAGATAAGGGTATCCTGATTCTAATTGAGTCAT 191835 |||| || ||||| ||| || | | ||| || || ||||||| |||||| || Sbjct 2802900 CACTTTGTTTGCATTATCTTTAAACATTAAATATGGATAACCTGATTGTAATTGTGTTTG 2802959 Query 191836 TGCAATTTGATTCATTAGTTTCATTGGTG-ATAATTCACATACAAATTTCTTAATATTTG 191894 |||||| ||||| | ||||| ||| || || | ||| | || ||||| Sbjct 2802960 TGCAATCATATTCAGCA-TTTCA--CGTGCATCTTT----TTTCTTTTTATCAACATTTG 2803012 Query 191895 GATTATTAACTAATTCATCATACATTACATCTAAATCCATCTCATCTAAAGGAATTCCAT 191954 | ||| ||| | |||||| || | ||||||| | || |||||||||| | || | Sbjct 2803013 GGTTAGCAACAAGTTCATCGTAATATTCATCTAAGTTAATATCATCTAAAGTGACGCCGT 2803072 Query 191955 ATTCTTTTTCGACACTATAAGGAGAGAATGTATAGAACTCTTCTTCTCCTGATTCTAGCA 192014 ||||||| | | ||| ||| | || ||| ||| |||| || || | | || Sbjct 2803073 ATTCTTTATAAATTGTATGAGGCGCAAACATATGGAAATCTTTGCCTTCTTTTGCAAG-- 2803130 Query 192015 ATTGAATAAATTTATCAGGAACAATAATTCCAGTTGAAAGTGTTTTCATACG-AATGCTA 192073 | || || ||| || ||||| | ||| ||||||| ||| || ||| || || Sbjct 2803131 -ATCAAAGAACTTAGATGGCACAATTAATCCTGTTGAAATTGTAGACAAACGTAAATCT- 2803188 Query 192074 TCGTCAGCATTGAtttttttAGTATTTAGGAAATGAATAATATCCCCATGAAAAATATTA 192133 || ||||| || | |||||| |||| || || | || ||| || |||||||| Sbjct 2803189 TCATCAGCGTTTACTTTTTTCGTATCTAAAAACTCTTCAACATCATAGTGGAAAATATTT 2803248 Query 192134 AGATAAACAGCTCCTGAGCCTTTGCGTTGACCCATCTGATCAGCATAAGAGAAACTTTGT 192193 | ||| || || || | || ||||| || | ||||| ||||| || | | Sbjct 2803249 AAATATACTGCACCCGCACCAGGACGTTGTCCAAGTTGATCTGCATAGCTAAAGCCACCT 2803308 Query 192194 TCCAATAATTTCATTACAGGAATAACACCTTTAGC--GGCATTTTCTTCACCATTTACTG 192251 || | | |||| || |||| || ||||| || || |||| | ||| || | | Sbjct 2803309 TCAAGTGATTTTGCAACTGGAAGTACGCCTTTGGCAACGCCTTTTAT--ACCTTTAATCG 2803366 Query 192252 GATCTCCAAGCATTCTTAATTTAGAAACATTTGTTGAAACCCCTCCACCAATTTTAGAGA 192311 || ||| | | |||||||| | ||| | | ||| || || ||||||||| | Sbjct 2803367 CTTCACCACGTGCGCGCAATTTAGATAAATTAATAGCAACACCGCCGCCAATTTTACTTA 2803426 Query 192312 GATACTTTGATTGTCCTTCAATATGACTAATTGAGTTTAGAGTATCATCAACTTCATCTA 192371 | || | | | ||||| | ||||||| || | | ||||| |||| || Sbjct 2803427 ACTGTTTAGCTGTTGAATCAATGAAATTAATTGAATTCAAGCTGTCATCTGTTTCAAGTA 2803486 Query 192372 AGAAACAAGATACAAGTTCCCCTCTTCTTGCTTTACCAGCATTAAGGAAAGTAGGAGTAG 192431 ||||||||||||||||||| || | | || ||||||||| | || ||||| || | Sbjct 2803487 AGAAACAAGATACAAGTTCACCACGACGAGCACGACCAGCATTTAAAAATGTAGGTGTTG 2803546 Query 192432 CAGGTTGAACTCTTTGTTCTATCATTGC 192459 | ||||| | |||||| | |||||| Sbjct 2803547 CCGGTTGGTAACGTTGTTCAACCATTGC 2803574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 803192323807840