Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031042.1 Length=111325 Score E Sequences producing significant alignments: (Bits) Value seq89 84.2 2e-11 >seq89 Length=3091062 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/136 (75%), Gaps = 5/136 (4%) Strand=Plus/Plus Query 22883 GATCCTAATTATGATATAAAACAGCTAGCACTAGAATGTTCTGCTACACGTATGTACCCA 22942 ||||| ||||||||||||||||| ||||| |||| || ||| ||| | | ||||| || Sbjct 556730 GATCCGAATTATGATATAAAACAATTAGCATTAGAGTGCTCTACTAAAAGAATGTATCCT 556789 Query 22943 GACTATTTAAGCTATGAGAAGGTTGTAG--CTGTTACTGGCGATTTTAAAGCCCCTATGG 23000 || ||| | ||||| || |||| | ||| || ||||||||||| || |||| Sbjct 556790 GATATTTTGAATTATGATAAAACGGTAGAAATATTA--GGTGATTTTAAAGCTCCGATGG 556847 Query 23001 GTTGTCG-TAGTTTTT 23015 ||||||| | |||||| Sbjct 556848 GTTGTCGTTCGTTTTT 556863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356109115104092