Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 4e-15 >seq89 Length=3091062 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 78760 ATGAAGTAAATACACTTTTCAGCTCTAATGGACAGACTCCTTTTGTAACAATTACATTTG 78819 ||||| | || ||| | | | || ||||| || || |||||||||||| | ||||| Sbjct 556527 ATGAAATTAACACATTGTATACATCAAATGGTCAAACACCTTTTGTAACATTAGGATTTG 556586 Query 78820 GTACGGGAACTGACTGGACTGAACGAATGATTCAGAAAGCAATTCTGAAAAATCGTATTA 78879 | ||||| || | || | || || |||||||||| || | | | || | Sbjct 556587 GATTAGGAACAGATACATATAGCCGTAAAATCCAACAAGCAATTCTTAACACTAGAATCA 556646 Query 78880 AAGGTCTTGGTCGTGATGGGATAACTCCTATTTTCCCTAAGCTTGTTATGTTTGTTGAAG 78939 ||||| | ||| ||| | || ||| | || ||||| || ||||| | | || || Sbjct 556647 AAGGTTTGGGTAAAGATCGTATTACTGCCATCTTCCCAAAACTTGTGTTTTCAATTAAAA 556706 Query 78940 AAGGTGTTAATCTTTACAAAGAC-GATCCGAACTATGATATTAAGCAGCTTGCTCTAGAG 78998 |||| || ||| |||| || |||||||| |||||||| || || | || ||||| Sbjct 556707 AAGGCGTGAAT-TTTAGTTCGAAAGATCCGAATTATGATATAAAACAATTAGCATTAGAG 556765 Query 78999 TGCGCAAGCAAAAGAATGTATCCTGATATT 79028 ||| | | ||||||||||||||||||||| Sbjct 556766 TGCTCTACTAAAAGAATGTATCCTGATATT 556795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546326425461600