Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq157 150 2e-31 >seq157 Length=245904 Score = 150 bits (166), Expect = 2e-31 Identities = 570/879 (65%), Gaps = 34/879 (4%) Strand=Plus/Minus Query 155711 GCCCGTGCATACATTGAGTATCGCCACGATCGCGATATTGCCCGTGAACAGAAAAGCAAA 155770 || ||| | ||||||||||| || |||||||| ||| | ||||| ||||| || Sbjct 54063 GCGCGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACAACGCTGCCGT 54004 Query 155771 CTGTTTACGGATATCTCCAGTATGGTGAATCTGTCCAATAAAGAGATCACCAACGAGAAC 155830 || | ||| || | || |||| | | | ||| | | | |||||||||| Sbjct 54003 TTGAATCAGGAAATTCGCGGTCTGGTTGAACAGAGCAACATGGCTCTGCTCAACGAGAAC 53944 Query 155831 GCGAACAAAGACGCAAGGGTTTTCCCGACACAGCGCGATCTGTTGGCGGGTATCGTAGCG 155890 || ||||||||| | || |||| || |||||||| ||| |||| |||||||| || Sbjct 53943 GCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGTTGCC 53884 Query 155891 AAACACT-TCGCACGTAACCACATTCTACCAAAACACATCGTAGAAGCGCATGATTCTGG 155949 || |||| | || | || || || || || || | || || ||||| || Sbjct 53883 AAGCACTATGCCAAGCAA-CATATCCTGCCGCGCGACGTGGTGATTGCCCATGAACGCGG 53825 Query 155950 TGATATCCATTATCATGATCTGGATTACAGCCCGTTC-ACGCCATACACAAACTGCTGTC 156008 ||| || || || || |||||||| ||| ||||||| | | || | ||||| | Sbjct 53824 TGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTC-AACTGTATGC 53766 Query 156009 TGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAAC 156068 | | || | |||| ||| || | || || |||||||||||||||||||| || || | Sbjct 53765 TTATCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATTGAGC 53706 Query 156069 CCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCTT 156128 | || ||||| ||| ||||| || | | ||| || |||| ||| ||| | || Sbjct 53705 CGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTGGCAA 53646 Query 156129 CTCACCAGTACGGCGGGACAACCTTTGCAAACG--TGGATAAAGTGCTGGCTCCGTATG- 156185 ||| |||||||| || ||| || || || | ||| || | ||||| |||| | Sbjct 53645 GCCACATCTACGGCGGCACCACCATT--AACCGTATCGATGAAATTCTGGCACCGTTCGT 53588 Query 156186 CAGAAAT-GACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTTCGTTAGAT 156244 || | | |||| ||||||| | ||| | ||| | ||| | ||| Sbjct 53587 CACCGCTAGCCATA--AAAAGCACCGGGAAACCGCTGATGAGTGGCACATTCC---CGAT 53533 Query 156245 -CGTA--CATATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTCCAATCGTA 156300 || | | |||||| || || | | ||| | || || ||||| ||| Sbjct 53532 GCGGACGCCTATGCGCTGTCTCGTACCTAGA-----GTGCTACGACGCCTTCCAGTCGCT 53478 Query 156301 TGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTATTAC 156360 ||||| ||||| || |||||||| |||||||| || || || || ||||| || || Sbjct 53477 GGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTCACCTTTGG 53418 Query 156361 TTTCGGTACTGGTAC-----GGGAATGTTTGAACGAATGATCCAGAAAGCGATTCTGAAA 156415 ||||| || || |||||| || |||||||| || | || ||| Sbjct 53417 TTTCGACCTCGGCACCAGTTGGGAAT-----CGCGTCTGATCCAGCAATCCATCCTGCGC 53363 Query 156416 AACCGTATTCGTGGTCTGGGTAAACAAGGTATTACCCCTGTGTTCCCTAAACTGGTCATG 156475 ||||||||| |||||||| ||| | ||| || | |||||||| |||||||| | Sbjct 53362 AACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGGTGTTC 53303 Query 156476 TTTATGGAAAAAGGTGTAAACATGAATCCTGGGGATCGTAACTATGACATCAAACAATTG 156535 ||| | ||||| || || ||| |||| |||||||||||||| ||| || Sbjct 53302 GCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAAGCAACTG 53243 Query 156536 GCTCTGGAATGCGCTTCGAAACGTATGTACCCAGATATC 156574 || ||||| ||| | || || |||||||| |||||| Sbjct 53242 GCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATC 53204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576562695561680