Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031059.1 Length=38773 Score E Sequences producing significant alignments: (Bits) Value seq157 331 2e-86 >seq157 Length=245904 Score = 331 bits (366), Expect = 2e-86 Identities = 486/680 (71%), Gaps = 21/680 (3%) Strand=Plus/Plus Query 15334 GCTCCCGCATCACCGCGCTGCCGGCCAACCCCGACACGGCGCGGGGGTTCAGTGCCAATG 15393 |||| ||||| ||||| ||||| |||||||| || |||||||| || || ||||||| Sbjct 178408 GCTCGCGCATTACCGCCCTGCCAGCCAACCCGGATACGGCGCGCGGCTTTGCCGCCAATG 178467 Query 15394 TGATCCTCGACGAATTCGCCTTTCACGCCAAGTCGCGCGAGATCTGGGCGGCGCTCTTCC 15453 || | || || || || |||||||| ||| | ||| | |||||||| ||||| || | Sbjct 178468 TGTTTCTTGATGAGTTTGCCTTTCATGCCGACAGCCGCAAAATCTGGGCAGCGCTGTTTC 178527 Query 15454 CGGTCGTGTCCAAGGGCGATCAGAAGCTGCGGGTGATCAGCACGCCCAACGGCAAGGGCA 15513 |||| | || || ||| | |||||||| || ||| || || |||||||| |||| Sbjct 178528 CGGTGATATCGAACGGCTAC---AAGCTGCGCGTCATCTCAACCCCGAACGGCAAAGGCA 178584 Query 15514 ACAAGTTCTTCGAGCTGATGACGG--CCGA----GGACAGTGTCTGGTCGCGCCATGTGG 15567 ||||||| | || |||||||| | ||| |||||| ||||||||||||||||| | Sbjct 178585 ACAAGTTTTATGAACTGATGACCGACCCGTCGCTGGACAGCGTCTGGTCGCGCCATGTTG 178644 Query 15568 TCGATATCTACGAGGCCGTGCGCCAGGGCTGCCCGC---GCGATGTGGACATGCTGCGCG 15624 ||||||| || |||| || | ||| | ||| || | |||||| | || | Sbjct 178645 TCGATATTCACCAGGCGGT---CAAGGACGGCCTGCCACGGGATGTGCCCGCCCT-CAAA 178700 Query 15625 CCGG-GATCGCGGACGAGGATGCCTGGGCGCAGGAATACGAGCTGAAATGGCTGGATGCC 15683 | || | || || || || |||||||||||||||| || ||| ||||| |||||| Sbjct 178701 CAGGCGCTCAATGATGAAGACGCCTGGGCGCAGGAATTTGAACTGCAATGGTTGGATGAG 178760 Query 15684 GCCAGCGCCTGGCTCGATTACGACCTGATCTCCGCCTGCGAACGCGAGGAGGCCGGCAAG 15743 ||| |||||||||| || |||||||| | | |||| | | |||||||||| Sbjct 178761 GCCGCCGCCTGGCTCTCCTATGACCTGATTGATGGCGTTGAACACCCGCAGGCCGGCAAA 178820 Query 15744 CCAGAGCTTTACCAGGGCGGCCCCTGCTTCGTGGGGGTCGACATTGCGGCGCGCAACGAC 15803 || | || || ||||| |||||||| || || || |||| || | |||| | ||| Sbjct 178821 CCGGCGCACTATCAGGGTGGCCCCTGTTTTGTCGGTATCGATATCGGTCTGCGCCATGAC 178880 Query 15804 CTGTTCGTGATCTGGGTGGTGGAAGAGACGGGCG--GCCGGCTGGTCACGCGCGAGGTGA 15861 ||||| ||||| |||||| | || || ||||| | | |||| |||||||| | | Sbjct 178881 CTGTTTGTGATATGGGTGATTGAGCAGGTGGGCGATGTGGTCTGG--ACGCGCGACATCA 178938 Query 15862 TTGCGCAAAAGCGGATCACATTCGCCGAACAGGACGCGCTGCTGGACGATGTCTTCCGCC 15921 || | | ||||| | || ||||||||||| |||||||| || | ||||| || Sbjct 178939 TTACCCGCAAGCGTGCACCCTTTGCCGAACAGGATGCGCTGCTAGATGGGGTCTTTGCCC 178998 Query 15922 GTTATCGCGTGGTGCGCGCGGGTATGGACCAGACCGGCATGGGCGAAAAACCGGTGGAGG 15981 || || || |||| | ||||||||||||||| |||||||||| |||||||| | Sbjct 178999 ACTACCGGGTACTGCGGTGCTGCATGGACCAGACCGGCCTGGGCGAAAAGCCGGTGGAAG 179058 Query 15982 ACGCCAAGCGCCGCCATGGC 16001 | ||||| ||||| |||||| Sbjct 179059 ATGCCAAACGCCGTCATGGC 179078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123949936354140