Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq157 91.5 4e-14 >seq157 Length=245904 Score = 91.5 bits (100), Expect = 4e-14 Identities = 180/254 (71%), Gaps = 23/254 (9%) Strand=Plus/Plus Query 21114 GTTGTCATAGTGATCA---CCTTTGTAGTTCCGGTTAATCACCACCGCTGAG--ACCAAT 21168 ||||||||||| || | |||| ||||| || ||||||||| ||| | |||| Sbjct 33410 GTTGTCATAGTAATGATTTCCTTGTTAGTTAAGGAACATCACCACCTA-GAGGTATCAAT 33468 Query 21169 C---AGAT-GGTGGTGAACTGTGCAGAGTTGGTCTTACCGGCTACAAAGGACCCGGCGCA 21224 | | || || ||||| ||| ||| |||| | |||||||| |||||||||||| Sbjct 33469 CTCTATATTGGCGGTGAGCTGAACAGGGTTGATACGACCGGCTAACAAGGACCCGGCGAG 33528 Query 21225 CCGTGAGGTGCCCCCACACAGCCCACCATAGAATATGGGTGCTAT----GCTTCACGCAT 21280 || || || |||||| ||||||||||| ||| || ||| | | |||||| Sbjct 33529 CCTTGCGGCTCCCCCATCCAGCCCACCAT----TAT-TCTGATATGGCGGACTGACGCAT 33583 Query 21281 aaaaaaaC-CGCTCGC-GCG-GTAATGCGCCTCTGTAG-TAATCCGGGAGACCAATCCCG 21336 |||||||| ||||| | ||| || |||||||| ||| ||| ||||| | ||| |||| Sbjct 33584 AAAAAAACACGCTCTCGGCGTGTTATGCGCCTTGTTAGTTAAACCGGGGTATCAAACCCG 33643 Query 21337 GCACTGGATTTTGC 21350 |||| || ||||| Sbjct 33644 GCACCTGAATTTGC 33657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133508177218728