Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq89 116 4e-21 >seq89 Length=3091062 Score = 116 bits (128), Expect = 4e-21 Identities = 187/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 159433 ATGAAGTAAATACACTTTTCAGCTCTAATGGACAAACGCCTTTTGTAACAATTACATTTG 159492 ||||| | || ||| | | | || ||||| ||||| |||||||||||| | ||||| Sbjct 556527 ATGAAATTAACACATTGTATACATCAAATGGTCAAACACCTTTTGTAACATTAGGATTTG 556586 Query 159493 GTACAGGAACTGACTGGACTGAACGAATGATTCAGAAAGCAATTCTGAAAAATCGTATTA 159552 | |||||| || | || | || || |||||||||| || | | | || | Sbjct 556587 GATTAGGAACAGATACATATAGCCGTAAAATCCAACAAGCAATTCTTAACACTAGAATCA 556646 Query 159553 AAGGTCTTGGTCGTGATGGGATAACTCCTATTTTCCCTAAGCTTGTTATGTTCGTTGAAG 159612 ||||| | ||| ||| | || ||| | || ||||| || ||||| | | || || Sbjct 556647 AAGGTTTGGGTAAAGATCGTATTACTGCCATCTTCCCAAAACTTGTGTTTTCAATTAAAA 556706 Query 159613 AAGGTGTTAATCTTTATAAAGACGATCCGAACTATGATATTAAACAGCTTGCTTTAGAGT 159672 |||| || ||| || | | |||||||| |||||||| ||||| | || ||||||| Sbjct 556707 AAGGCGTGAATTTTAGTTCGAAAGATCCGAATTATGATATAAAACAATTAGCATTAGAGT 556766 Query 159673 GCGCAAGCAAAAGAATGTATCCTGATATT 159701 || | | ||||||||||||||||||||| Sbjct 556767 GCTCTACTAAAAGAATGTATCCTGATATT 556795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542649689897520