Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq89 116 4e-21 >seq89 Length=3091062 Score = 116 bits (128), Expect = 4e-21 Identities = 195/281 (69%), Gaps = 1/281 (0%) Strand=Plus/Minus Query 41851 AATATCAGGATACATCCTTTTGCTTGCACACTCTAGAGCAAGCTGTTTAATATCATAGTT 41910 ||||||||||||||| ||||| | | ||||||| || | ||||| |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 41911 CGGATCGTCTTTATAAAGATTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAAAAT 41970 |||||| | | || ||| || |||| || || | | ||||| || ||||| || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 41971 AGGAGTTATCCCATCACGACCGAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 42030 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 42031 CATTCGTTCAGTCCAGTCAGTTCCTGTACCAAATGTAATTGTTACAAAAGGTGTTTGTCC 42090 | || | || |||||| |||||| | |||||||||||||||||| || Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 42091 GTTTGAACTAAAGAGAGTATTTACTTCATATTCATAAGCTT 42131 ||||| || | | || || | ||||||||| ||| ||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 140271 TGCAATGTTGAATGGCAAGCCCAAGAACACGTCAACACTTCTTTGATACCACTG-CAAAT 140329 ||||||||| ||||||| || ||||| | ||| ||||||| ||||| | || ||| | Sbjct 2013384 TGCAATGTTAAATGGCACACCTAAGAATATATCAGCACTTCTCTGATATAATTGGCAACT 2013325 Query 140330 CTAAATAGCCATTACGCACATTAAACTGATAGAACATATGACAAGGTGGTAATGCCATAT 140389 | || | |||| | |||| ||| || | | | |||| || |||||||| ||||| Sbjct 2013324 C-AATTTTCCATCTTGAACATAAAATTGGAACATCGTATGGCATGGTGGTAAAGCCATTG 2013266 Query 140390 ATTTAAGTTCAGCTGGATTCCACGCAGAAA 140419 | || ||||| ||||||||||||||||| Sbjct 2013265 TATCAATTTCAGTTGGATTCCACGCAGAAA 2013236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530333105749440