Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq89 102 5e-17 >seq89 Length=3091062 Score = 102 bits (112), Expect = 5e-17 Identities = 201/296 (68%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 70292 GTAATTAATGAGATTAAAACTAATCCAAATAGCCGTCG---TATGATTGTCACGGGGTGG 70348 ||||||||| | ||||||| ||| || ||| ||| | ||| ||| | | |||| Sbjct 2013190 GTAATTAATCAAATTAAAAATAACCCTAATTCTCGTAGACATATCATTT---CTGCGTGG 2013246 Query 70349 AACCCTCATGAGATTGAAGATGTAGACCTTCCACCATGTCATACACTATTCCAATTCTTT 70408 || || ||| ||||| | | | |||||||| ||||| | |||||||| | | Sbjct 2013247 AATCCAACTGAAATTGATACAATGGCTTTACCACCATGCCATACGATGTTCCAATTTTAT 2013306 Query 70409 GTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAACGTAGTGCTGACATTTTACTTGGT 70468 || ||||||| || | |||||| ||||||| | |||||||| || || | ||| Sbjct 2013307 GTTCAAGATGGAAAATTGAGTTGCCAATTATATCAGAGAAGTGCTGATATATTCTTAGGT 2013366 Query 70469 GTGCCATTCAATATTGCATCATATGCCTTACTTACACATCTTATTGCTGCTGAGTGTGGG 70528 |||||||| || |||||| ||| ||| | || || | || ||| || ||||| Sbjct 2013367 GTGCCATTTAACATTGCAAGTTATAGTTTATTAACGCACTTAATAGCTAAAGAATGTGGT 2013426 Query 70529 TTAGGTGTTGGTGAGTTTGTTTGGACTGGTGGTGATATCCATGTGTACTCGAATCA 70584 |||| || || || ||||| ||| ||||||| ||| | ||||| ||||| Sbjct 2013427 TTAGAAGTCGGAGAATTTGTGCATACTTTTGGTGATGCTCATATTTACTCAAATCA 2013482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335568666082174