Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq46 147 5e-30 seq69 118 2e-21 >seq46 Length=4728336 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| || ||||||||||||||||| || ||||| |||||||| ||||| | | ||| | Sbjct 1480609 GAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTGCG 1480668 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||||||||| || ||||| ||||| |||||||||||||| | | ||| ||||| Sbjct 1480669 CCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCTTC 1480728 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || |||||||| ||||||| | || | | || || || ||||||||||| Sbjct 1480729 TTTATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAGAGT 1480788 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||| ||||| |||| ||||| Sbjct 1480789 GATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 147 bits (162), Expect = 5e-30 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| || || || || ||||||||||||||||| || | | || | ||||| || Sbjct 1570237 ACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGCGTACGACCATCCTCG 1570178 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 || ||||| ||||||||||| | ||||||||||| | | ||||||||||| |||| Sbjct 1570177 AGCTGCTTT--CCGGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTT 1570120 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTT 152073 | ||||| ||||||| | || | | |||| || ||| ||||| | ||| || || | Sbjct 1570119 GGATTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAACTTCCAAAGTGATTGTCT 1570060 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || |||||||||||||||| ||||||||| Sbjct 1570059 TTCCAGTAAGAGTCTTCACGAAGATCTGCATTTT 1570026 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| || || || || |||||||| ||||| || || | | |||| |||||||| Sbjct 1481531 ACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCGACCATCTTCA 1481590 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| || ||||| || | ||||||||| || | | ||||||||| || ||||| Sbjct 1481591 AGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTCTTTATCTTGG 1481650 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || ||| |||||| | || | |||| ||| |||||||||||| |||||||| ||| Sbjct 1481651 ATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGTAATAGTCTTG 1481710 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| ||||||| |||||| Sbjct 1481711 CCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 127 bits (140), Expect = 5e-24 Identities = 163/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| || | ||||||||||||||| || ||||| |||||||||||||| | | || Sbjct 1480151 CTGAGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTG 1480210 Query 151944 CTCCCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | || ||||| | ||||| || || || || | |||||||||||| | | ||| | Sbjct 1480211 CGTCCGTCTTCCAATTGCTTT--CCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCC 1480268 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| || ||||| || ||||||| | || | | |||| || ||| ||||| | Sbjct 1480269 CTTCCTTATCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGA 1480328 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || | ||| ||||| |||| ||||| Sbjct 1480329 GGGTGATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| || | |||||| ||||| || || ||||| || |||||||| |||| | |||| Sbjct 1463662 CTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTT 1463721 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| ||||| ||||||||||| ||||| || | | || ||| Sbjct 1463722 CGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCT 1463781 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || ||| ||| | || | |||| || |||||||| | | Sbjct 1463782 TCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAA 1463841 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| ||||| || || | || || || |||| |||||| Sbjct 1463842 GTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 114 bits (126), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||| || ||||| ||||| || ||||| ||||||| | |||| || ||||| Sbjct 1481303 ACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAAAGTGTTCGGCCGTCTTCA 1481362 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 || ||||| || || || || | ||||||||| || | | || || || || |||| Sbjct 1481363 AGTTGCTTT--CCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTTTATCTT 1481420 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTT 152073 |||| || ||| ||| | || | | || ||| ||| ||||| | ||| || || | Sbjct 1481421 GAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGACTTCCAAAGTGATGGTCT 1481480 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || |||||||||||||||| |||||| Sbjct 1481481 TTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 ||||| || | ||| | ||| || || ||||| ||||| ||||| | | || | |||| Sbjct 1481069 CTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAGAGCGTACGCCCA 1481128 Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || || ||| ||||| || || |||||||||||||| | | || ||||| || Sbjct 1481129 TCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTG 1481188 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 ||||| ||||| ||||||| | || | ||||||| ||| ||||| | ||| || Sbjct 1481189 TCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACTTCTAAAGTTATG 1481248 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || || | ||||| Sbjct 1481249 GTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 109 bits (120), Expect = 1e-18 Identities = 152/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || ||||||||||||||||| || | | ||| | ||||| || | Sbjct 1570463 CAAG-TGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCCTCGA 1570405 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || ||||| | ||||||||||| | | ||||||||||| ||||| Sbjct 1570404 GCTGCTTT--CCTGCAAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTG 1570347 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| |||| | | | || || || ||||| | || || || || Sbjct 1570346 GATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACTTCCAAGGTGATGGTCTT 1570287 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||||||||||| |||||| Sbjct 1570286 TCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 107 bits (118), Expect = 4e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| || | ||||| || || || || ||||||||||| |||||||| | ||| || Sbjct 1480379 CTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAATGTA 1480438 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| ||||| || || | |||||||| || | | ||| ||| Sbjct 1480439 CGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCT 1480498 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| || | || | | || ||| || ||||| | Sbjct 1480499 TCTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAG 1480558 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| || || | || ||||| |||| |||||| Sbjct 1480559 GTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCATT 1480600 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| || | |||||||||||| || || ||||| || ||||| ||||| | | ||| Sbjct 1463890 CTGAGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCCGAAAGAGTG 1463949 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| | ||| ||||||||||| | |||||| || || | | ||| ||| Sbjct 1463950 CGTCCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCT 1464009 Query 152004 TCCTTTTCTTGAATTTT 152020 || || || ||||| || Sbjct 1464010 TCTTTATCCTGAATCTT 1464026 >seq69 Length=2547145 Score = 118 bits (130), Expect = 2e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| ||||||||||| || | | ||| || || ||||| || ||||||||||| | Sbjct 1551504 CTTTCTGGATGTTGTAGTCCGAAAGAGTCCTGCCGTCTTCGAGCTGCTTCCCGGCGAAAA 1551563 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | |||||| ||||||| | ||| || ||||| ||||| || || ||||||| | | Sbjct 1551564 TCAACCTCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTTT 1551623 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| || ||| || ||||| || || || |||||||| || |||||||| | Sbjct 1551624 CAATTGTGTCAGACTGCTCGACCTCAAGGGTGATTGTCTTGCCCGTTAGGGTCTTCACAA 1551683 Query 152095 AGACCTGCATTTT 152107 | | |||||| || Sbjct 1551684 AAATCTGCATCTT 1551696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153800073772742