Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq145 98.7 1e-15 seq570 91.5 2e-13 >seq145 Length=74475 Score = 98.7 bits (108), Expect = 1e-15 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 17703 ATGGGGTTGTAGCTCAGTCGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGAGGGTTCA 17762 |||||| ||||||||||| ||||||||||| ||||||||||||| || |||| | ||||| Sbjct 72176 ATGGGGGTGTAGCTCAGTTGGTTAGAGCGCATGCCTGTCACGCATGAGGTCGTGAGTTCA 72117 Query 17763 AGTCCCTTCAGTCCCGTATGCCACTT-TAGCTCA 17795 |||| | ||| |||||||| |||| |||| || Sbjct 72116 AGTCTCATCACTCCCGTATATAACTTCTAGCACA 72083 >seq570 Length=38645 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918 |||| ||||||||| ||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 38309 GGGGGCTTAGCTCAGATGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC 38368 Query 17919 CCGCTATTCTCCA 17931 |||||| |||||| Sbjct 38369 CCGCTAGTCTCCA 38381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596296749716320