Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq46 122 6e-23 >seq46 Length=4728336 Score = 122 bits (134), Expect = 6e-23 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| ||||| || ||||| || ||| || |||||||||||||| || Sbjct 1570259 CATACCTCCTCTCAACCTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTC 1570200 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || |||||||| ||||| |||||||| | |||||| |||| Sbjct 1570199 AGAAAGCGTACGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGG 1570140 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283 || | |||||||| || || || |||| || ||| | |||||||| | | Sbjct 1570139 GGGAATTCCTTCCTTGTCTTGGAT-TTTAGCTTTGACATTGT--CAATGGTGTCCGATGG 1570083 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || || |||||||| || || |||||||||||||| ||||| Sbjct 1570082 CTCAACTTCCAAAGTGATTGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCAT 1570029 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| || || | ||||| ||| || || || |||||||||||||| || | Sbjct 1570483 CCTCCTCTAAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAA 1570424 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || || |||||||| || ||||||||||| | |||||| |||| || Sbjct 1570423 AGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGA 1570364 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| || ||||| ||| | | | ||||| |||| | ||| || Sbjct 1570363 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACT 1570304 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || |||||||| || ||||||||||||||||| ||||| Sbjct 1570303 TCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 118 bits (130), Expect = 8e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || ||||| || || ||||| ||| || || |||||||||||||| Sbjct 1480141 CATGCCGCCTCTGAGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATC 1480200 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| |||| ||||| || ||||| || || | |||||| |||| Sbjct 1480201 CGAAAGTGTGCGTCCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGG 1480260 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | |||||||| ||| ||||| |||| | || | |||||||| | | | Sbjct 1480261 AGGGATCCCTTCCTTATCCTGAATCTT-AGCTTTGACATTATCAATGGTGTCAGATGGCT 1480319 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | || || |||||||| || | || ||||| ||||||||||| Sbjct 1480320 CGACTTCGAGGGTGATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 114 bits (126), Expect = 9e-21 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| || ||||| || |||||||| || || || || |||||||| Sbjct 1463649 TTGCATTCCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTA 1463708 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||| ||||| || | || || || || || ||||||||||| | | |||||| Sbjct 1463709 GTCGGAAAGAGTT--CGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGA 1463766 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | |||||| || ||| ||||| |||| || | || ||||| | Sbjct 1463767 TCTGGAGGAATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGAT 1463826 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || |||| ||||| || || || || | ||| || || ||||||||||| Sbjct 1463827 GGTTCTACTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCAT 1463882 Score = 113 bits (124), Expect = 3e-20 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || |||||| || || || || || || || || ||||| || Sbjct 1481278 TTGCATCCCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATA 1481337 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| ||| || |||| || || ||||| || ||||| ||||| | ||||||||| Sbjct 1481338 ATCGGAAAGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATC 1481397 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282 || ||| | ||| || || || ||||| |||| || || | || || || | | Sbjct 1481398 TGGAGGAATACCCTCTTTATCTTGAATCTT-AGCTTTAACATTTTCAATTGTATCAGAAG 1481456 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||| || || |||||||| || || |||||||||||||| |||||| Sbjct 1481457 GCTCGACTTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCATG 1481512 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || || | || || ||||| ||| || || |||||||| || Sbjct 1480594 TTGCATTCCACCACGGAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATA 1480653 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || |||| | || || | |||||| ||||||||||| | | |||||| || Sbjct 1480654 ATCAGAAAGAGTGCGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTC 1480713 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | |||||| || ||| || ||| || | || | || || || | | Sbjct 1480714 TGGTGGGATACCTTCTTTATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGG 1480773 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || ||||||||||| || | || ||||| ||||||||||| Sbjct 1480774 TTCGACTTCAAGAGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| || || || || ||||| || ||| || |||||||| ||||| Sbjct 1480366 TTGCATACCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTA 1480425 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | | || | || || || || || |||||||| ||||| | ||||||||| Sbjct 1480426 ATCTGATAATGTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATC 1480485 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || ||| | ||||| |||| | | | || |||| | | || | || || || | | Sbjct 1480486 TGGAGGGATACCTT-CTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAG 1480544 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| || || || || || || | || ||||| ||||||||||| Sbjct 1480545 GTTCGACTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCAT 1480599 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| ||||||||| ||||| || || || ||||| ||||| || || Sbjct 1481509 CATGCCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTC 1481568 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || ||||| || || || || ||||| | ||||||||||| Sbjct 1481569 AGAAAGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGG 1481628 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || ||||| ||| | || | || ||||||| | || Sbjct 1481629 GGGGATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTC 1481688 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | ||||| |||||||| ||||| Sbjct 1481689 TACTTCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||| ||||||| || ||||| || || || || || || |||||||||| | Sbjct 1479917 CCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAG 1479976 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| || | || ||||| ||||| ||||||||||| | | |||||||||| || Sbjct 1479977 AGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGA 1480036 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGGATTCCAC 44289 | ||||| || || || || |||| | | || | ||||| || | | || || Sbjct 1480037 ATTCCTTCTTTATCTTGGAT-TTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGAC 1480095 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || || || || || || | ||||| |||||||| |||||| Sbjct 1480096 TTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCATG 1480144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359984248889034