Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 8e-12 >seq3 Length=17889087 Score = 86.0 bits (94), Expect = 8e-12 Identities = 221/334 (66%), Gaps = 2/334 (1%) Strand=Plus/Plus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533 ||| ||| | || |||||||| || ||||| ||||| ||||| ||||| ||| | | | Sbjct 15711935 AGGGGATCTTGGGCCTGTTTATGGATTTCAGTGGAGGCATTTCGGAGCCGATTATAAAGA 15711994 Query 50534 T-TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 ||| || | ||||| ||| ||||| || || ||| | | |||| || Sbjct 15711995 CATGC-ACACAGATTACACAGGACAAGGTGTCGACCAATTAATGGCTGTAATAAACACTA 15712053 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | ||||| || ||| | || || | || | ||| |||||||||||| | || ||| Sbjct 15712054 TTAAAACCAATCCCAATGACCGAAGGATGATTATGTGCGCCTGGAATCCTATGCATTTAG 15712113 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTTT 50712 | | | | | |||| || || ||| ||| |||||||||| || | | | Sbjct 15712114 ACAAGATGGCTCTACCCCCTTGCCATTGTTTGGTACAATTTTATGTTGCAAATGGCGAAT 15712173 Query 50713 TATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAG 50772 |||| || || ||||| ||||| || || ||||| ||||| ||||| || ||| | | Sbjct 15712174 TATCTTGCCAGCTGTATCAGAGATCGGCAGACATGGGCTTAGGAGTTCCATTTAACATTG 15712233 Query 50773 CTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 | || ||| | ||||| || |||| ||||| Sbjct 15712234 CAAGCTATGCTCTTTTAACATACATGATTGCTCA 15712267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667063509507120