Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq46 174 4e-38 seq69 125 2e-23 >seq46 Length=4728336 Score = 174 bits (192), Expect = 4e-38 Identities = 170/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||| | |||||||| || ||||||||||| || || || ||| Sbjct 1480368 CAAATCTTTGTGAAAACTTTAACAGGAAAGACAATCACCCTCGAAGTCGAGCCATCTGAC 1480309 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| ||||||||||| || ||||| |||||||| |||||||| Sbjct 1480308 ACCATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAAGGGATCCCTCCAGACCAGCAG 1480249 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || ||||| || | ||||| ||| | || ||| | ||||| ||| || Sbjct 1480248 AGGTTAATTTTTGCTGGAAAGCAATTGGAAGACGGACGCACACTTTCGGATTACAACATC 1480189 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || || |||||||| ||||| |||||| Sbjct 1480188 CAGAAAGAATCCACTCTTCATCTTGTCTTGAGGCTCAGA 1480150 Score = 163 bits (180), Expect = 7e-35 Identities = 169/221 (76%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || |||||||| ||||| || ||||| || ||||| | || || || Sbjct 1570026 AAAATGC---AGATCTTCGTGAAGACTCTTACTGGAAAGACAATCACTTTGGAAGTTGAG 1570082 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||| || || |||||| || || || ||||| |||||||| || || Sbjct 1570083 CCATCGGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAGGAAGGAATTCCCCCA 1570142 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || | |||||||||||||| |||||||| ||||| | || ||| | || Sbjct 1570143 GACCAGCAGAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACGCTTTCTGAC 1570202 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 || ||| ||||||||||||| || || || ||||||||||| Sbjct 1570203 TACAACATCCAAAAAGAATCCACCCTCCACCTTGTTTTGAG 1570243 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| | ||||| ||||| |||||| | || || ||| || || Sbjct 1480596 CAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTCTGAT 1480537 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || ||||| ||||||||||| |||||||| || ||||| Sbjct 1480536 ACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCAGCAG 1480477 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| ||||| || |||||||| | || | | ||||| || || Sbjct 1480476 AGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCGTACATTATCAGATTACAATATC 1480417 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| || |||||||| || |||||| Sbjct 1480416 CAAAAAGAATCCACACTCCACCTTGTTTTAAGGCTCAGA 1480378 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | ||||| ||||| ||||| || ||||| ||| || ||| Sbjct 1481052 CAAATATTCGTAAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTCGAACCATCCGAC 1480993 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| |||||||| ||||| || || || || Sbjct 1480992 ACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGCATCCCACCAGATCAACAG 1480933 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||| ||||||||| | ||||||||| | |||||| | || || || | Sbjct 1480932 AGGTTAATCTTCGCTGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGACTACAATATT 1480873 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || || || || |||||||| || ||| Sbjct 1480872 CAAAAAGAATCCACCCTTCACCTCGTTTTGAGGCTGAGA 1480834 Score = 154 bits (170), Expect = 4e-32 Identities = 142/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177963 CTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAA 178022 || ||||| ||| || ||||| || || || || || ||||||||||| |||||| Sbjct 1464068 CTTGAGGTCGAACCATCCGACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAA 1464009 Query 178023 GGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGG 178082 || ||||| || || || || | | |||||||||||||||||| | ||||||||| | Sbjct 1464008 GGCATCCCACCAGATCAACAGAGGTTAATCTTCGCCGGAAAACAGTTGGAAGATGGACGC 1463949 Query 178083 ACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| | ||||||||| | || |||||||||||||| |||||||| ||||| |||||| Sbjct 1463948 ACTCTTTCGGATTATAACATTCAGAAAGAATCAACACTTCATCTTGTCTTGAGGCTCAGA 1463889 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || ||||| || |||||| | || || ||| || || Sbjct 1570260 CAGATCTTCGTGAAGACCCTTACTGGAAAGACCATCACCTTGGAAGTTGAACCATCCGAT 1570319 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| ||||| ||||| || ||||| |||||||| || || |||||||| Sbjct 1570320 ACCATTGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAG 1570379 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| |||||||| |||||| | |||||| | || || ||| || Sbjct 1570380 AGATTGATCTTTGCAGGAAAGCAGCTCGAGGATGGACGTACTCTTTCTGACTACAACATC 1570439 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 |||||||||||||| || || |||| Sbjct 1570440 CAAAAAGAATCAACCCTCCA-CTTG 1570463 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || || || || || || || || ||| Sbjct 1481736 CAGATCTTCGTAAAGACTTTAACCGGCAAGACTATTACACTTGAAGTAGAGCCTTCCGAC 1481677 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||| || || |||||||||||||| || || ||||| Sbjct 1481676 ACTATTGAAAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCCCCAGATCAGCAG 1481617 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || ||||| ||||||||||| |||||||| | || ||| | || |||||| | Sbjct 1481616 AGGTTGATTTTCGCTGGAAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTATAACATT 1481557 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||||| || || ||||| |||||| | ||| Sbjct 1481556 CAAAAAGAATCAACCCTCCACCTTGTGTTGAGATTGAGA 1481518 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || ||||| ||||| ||||| || || ||||| Sbjct 1480140 CAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGAGCCATCAGAT 1480081 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| || || || || ||||||||||| || || || |||||| Sbjct 1480080 ACCATTGAAAACGTAAAAGCCAAAATCCAAGATAAAGAAGGAATTCCCCCAGATCAGCAA 1480021 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| ||||| || || || |||||||| | || || ||||||| || | Sbjct 1480020 AGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCGTACACTCTCCGATTACAATATT 1479961 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || || || || || |||||||| || Sbjct 1479960 CAGAAAGAATCTACTCTCCACCTCGTACTGAGACTCCGA 1479922 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||||| || ||||| || || || | || || || |||||| Sbjct 1481280 CAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGAGCCATCAGAC 1481221 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || || || ||||||||||| || || || |||||||| Sbjct 1481220 ACTATTGAAAATGTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACCAGCAG 1481161 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || ||||||||||| ||||| ||||| | || || | ||||||||| | Sbjct 1481160 AGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATAACATT 1481101 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| ||||| || ||||| | ||| Sbjct 1481100 CAAAAGGAATCGACTTTGCATTTGGTT 1481074 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| |||||||| || ||||| | || || || || || Sbjct 1481508 CAGATCTTCGTGAAGACTCTTACAGGAAAGACCATCACTTTGGAAGTCGAGCCTTCTGAT 1481449 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| |||||||| || ||||| || || ||||| || ||||| Sbjct 1481448 ACAATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAGCAG 1481389 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || ||||| || || ||||| || | || ||| ||||||||||| | Sbjct 1481388 AGGTTGATTTTTGCAGGAAAGCAACTTGAAGACGGCCGAACACTTTCCGATTATAACATT 1481329 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 || |||||||| || || |||||||| |||||| Sbjct 1481328 CAGAAAGAATCTACCCTCCATCTTGTATTGAGA 1481296 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||| | || |||||||| ||||| | || || || ||||| Sbjct 1481964 CAGATCTTTGTGAAAACTTTGACCGGAAAAACCATCACATTGGAAGTTGAGCCTTCAGAT 1481905 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || || || |||||||||||||| ||||| || ||||| ||| Sbjct 1481904 ACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATCCCGCCAGACCAACAA 1481845 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || ||||| || || || || || ||||| || ||||| | ||||||||| | Sbjct 1481844 AGGCTGATTTTCGCTGGCAAGCAACTTGAGGATGGTAGAACTCTCTCGGATTATAACATT 1481785 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || ||||| |||| Sbjct 1481784 CAAAAGGAATCGACTCTGCA-CTTG 1481761 >seq69 Length=2547145 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || || || || || || |||||||| ||||| || || ||| Sbjct 1551690 CAGATTTTTGTGAAGACCCTAACGGGCAAGACAATCACCCTTGAGGTCGAGCAGTCTGAC 1551631 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||| || || || || || ||||| |||||||| || Sbjct 1551630 ACAATTGAAAATGTCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCGGACCAACAG 1551571 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || |||||||| || ||||||||||| || ||||||||| | || || ||| || Sbjct 1551570 AGGTTGATTTTCGCCGGGAAGCAGCTCGAAGACGGCAGGACTCTTTCGGACTACAACATC 1551511 Query 178104 CAAAAAG 178110 || |||| Sbjct 1551510 CAGAAAG 1551504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203709577225988