Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq107965 100 3e-17 >seq107965 Length=3769 Score = 100 bits (110), Expect = 3e-17 Identities = 109/144 (76%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 14528 TGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAGG 14587 |||||| ||||||||||| || | | ||||| ||||||||||||||| | || || || Sbjct 2723 TGGAACTGTAAAATGGTTCAATGAATCAAAAGGCTTTGGCTTTATCACTCCTGATGATGG 2664 Query 14588 CA---AAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGA 14644 || |||| |||| | ||| || ||| | || ||| ||||| || ||| | | | Sbjct 2663 CACACCAGATGTGTTTGTTCATTTTTCAACGATTCAAGGCGATGGTTTTAAAACTTTAGC 2604 Query 14645 TGAAGGTCAAAAAGTTGAATTTGA 14668 |||||||||||||||||| ||||| Sbjct 2603 TGAAGGTCAAAAAGTTGAGTTTGA 2580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48357811650146