Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq172366 86.0 1e-11 >seq172366 Length=6938 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 94168 ACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTG 94227 |||||| |||| | || ||||| |||| || || || || | || |||| | Sbjct 4287 ACAAACATGTTTAGAGCAATAGACGCCAGGTTACAAACAGCTATCTCGTCCGGTGCTGAA 4228 Query 94228 TACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTA 94287 || | |||||||| ||||||||||| | || ||| | || ||||||| ||||||| Sbjct 4227 TATTCTACAATTTCTGTGCACAAATTGCTGCATTTAATGGTTCCAACATTTTTTTGGTTA 4168 Query 94288 GACTTTCTATTGATGGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337 ||||| ||| | ||||||| | ||| |||||||||||||||||| Sbjct 4167 CTTTTTCTGTTGCAAGAATCCTTATATAACATATAAGGTGTTCCAGTTTC 4118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987398119962955