Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq76123 84.2 2e-11 >seq76123 Length=2128 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| || | ||| | | ||||| ||| || || ||||||||| || ||||| ||| Sbjct 987 ACCACCACGCAAGCGGAGCACCAGATGAAGTGTCGACTCTTTTTGGATGTTATAGTCGGA 1046 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 |||| || |||| |||||||| || || ||||| || || |||||||| || | || Sbjct 1047 TAATGTGCGTCCATCTTCCAATTGCTTACCAGCAAAAATTAAACGTTGCTGATCTGGTGG 1106 Query 44014 TACACCTTCTTTATCT 44029 | ||||||||||||| Sbjct 1107 AATACCTTCTTTATCT 1122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354032163591348