Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq18725 95.1 7e-15 >seq18725 Length=24047 Score = 95.1 bits (104), Expect = 7e-15 Identities = 185/271 (68%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 21096 GGGCAAGACCCGGAGATCAGGTATATACCAAATGGCGGCGCGGTCGGAAGACTCAGC-AT 21154 |||||||| || || | | ||||| |||||||| || || || | ||| | | || Sbjct 10236 GGGCAAGATCCTGATGTTAAATATATGCCAAATGGTGGTGCAGTTACGA-ACTTAACGAT 10294 Query 21155 CGCAACGAATGAATCATGGCGCGACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATG 21214 ||||| ||| | ||| || || ||||| || || | |||| | |||||||| Sbjct 10295 TGCAACATCGGAAACTTGGAAAGATAAACAAACAGGTCAGCCACAAGATCGTACAGAATG 10354 Query 21215 GCATAAAGTCGTTTTGTTCGGAAAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGG 21274 ||| | | ||| | || |||||||||||||||||||| || | ||| | |||||| Sbjct 10355 GCACCGAATTGTTATTTTTGGAAAACTTGCTGAAATTGCAGGTCAATATCTTAAAAAAGG 10414 Query 21275 TTCTCAGGTCTACATCGAAGGGAAACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGT 21334 ||| | || || || ||||| || | |||| | || ||||| ||| | ||| Sbjct 10415 TTCGCTTGTTTATATTGAAGGTCAATTACAAACAAGAAAATGGACGGATAAAAACGGACA 10474 Query 21335 AGAACGTTACACGACGGAAATTATCGTCAGC 21365 ||| ||||| || || ||||| | |||||| Sbjct 10475 AGATCGTTATACAACAGAAATCGTTGTCAGC 10505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 302598061244721