Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq62589 86.0 8e-12 >seq62589 Length=22093 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 3002 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA 3061 Query 164884 TCCCACTCCCGC 164895 ||| ||||||| Sbjct 3062 TCCGGCTCCCGC 3073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626614721110400